| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 205097 = | 42 (0.880) | 58 (1.650) +TTATAACATTTTA |
15/76 | NT | 64.0% | intergenic (+8/‑29) | rnhB/dnaE | ribonuclease HII, degrades RNA of DNA‑RNA hybrids/DNA polymerase III alpha subunit |
| ? | W3110S.gb | 4139149 = | 46 (0.970) | coding (2/1023 nt) | frlB | fructoselysine‑6‑P‑deglycase | |||||
Only 100 of 134 total aligned reads displayed.
GCGACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGCACAGCG > W3110S.gb/205027‑205165 | gcgACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTtgtg < 1:2357722/71‑1 (MQ=255) gACCGAACACCATCGGCGCAGCTTTGGGCCTGCCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTc < 1:58661/71‑1 (MQ=255) acacCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTc < 1:704233/65‑1 (MQ=255) acacCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTc < 1:2866813/65‑1 (MQ=255) acacCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGAtt < 1:2755784/71‑1 (MQ=255) ccATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAg > 1:2318454/1‑71 (MQ=255) tGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCt < 1:2555848/69‑1 (MQ=255) tGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTg < 1:203921/70‑1 (MQ=255) gggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGa < 1:3793529/70‑1 (MQ=255) gggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGa < 1:2493073/70‑1 (MQ=255) ggCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa < 1:1034075/70‑1 (MQ=255) gCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTg > 1:1028191/1‑67 (MQ=255) ccTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:1140198/71‑1 (MQ=255) cTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:29566/1‑71 (MQ=255) cTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:3026188/1‑71 (MQ=255) tGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:1850631/1‑70 (MQ=255) tCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCt > 1:2532664/1‑71 (MQ=255) tCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCt < 1:3122996/71‑1 (MQ=255) cAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAAc > 1:4192680/1‑52 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGAt > 1:844668/1‑42 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGa > 1:1889431/1‑64 (MQ=255) aaaCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTg > 1:1879695/1‑70 (MQ=255) aCGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAAt > 1:2122326/1‑55 (MQ=255) taatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:603664‑M1/30‑1 (MQ=255) taatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGATg > 1:2038406‑M1/32‑63 (MQ=255) cgcgCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAAcc < 1:3106057/71‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTaa < 1:2145310‑M1/11‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTa < 1:1796686‑M1/10‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTaa < 1:2136620‑M1/15‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAAc < 1:188698‑M1/17‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAAc < 1:1258400‑M1/17‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:1310281‑M1/30‑1 (MQ=255) aatggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:2552015‑M1/30‑1 (MQ=255) atggagaaaataaaattaaaatgttataaGTCgaga < 1:3752173‑M1/7‑1 (MQ=255) atggagaaaataaaattaaaatgttataaGTCgag < 1:40114‑M1/6‑1 (MQ=255) atggagaaaataaaattaaaatgttataaGTCGAGATTAAGTaaa < 1:3843933‑M1/16‑1 (MQ=255) atggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:3251255‑M1/28‑1 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTaaa > 1:2853349‑M1/29‑44 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTaaa > 1:4393216‑M1/29‑44 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3595250‑M1/29‑56 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAgatgacc > 1:2818490‑M1/29‑60 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAgatgacc > 1:3671014‑M1/29‑60 (MQ=255) tggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAgatgacc > 1:3589929‑M1/29‑60 (MQ=255) ggagaaaataaaattaaaatgttataaGTCGAGATTATGTAAACCg > 1:935439‑M1/28‑46 (MQ=255) ggagaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:376075‑M1/30‑1 (MQ=255) gagaaaataaaattaaaatgttataaGTCGAGATTaa < 1:4175247‑M1/11‑1 (MQ=255) tGGGACTTGCGTCCCGATTCTTGTGTCGAGATTAAGTa < 1:4058938/38‑1 (MQ=255) gaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATc < 1:2433816‑M1/24‑1 (MQ=255) gaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:1221798‑M1/25‑52 (MQ=255) gaaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:1745387‑M1/30‑1 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTa > 1:1943860‑M1/24‑37 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGTAATCTGaa > 1:15420‑M1/24‑51 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:347948‑M1/24‑51 (MQ=255) aaaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGa > 1:2200183‑M1/24‑50 (MQ=255) ggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGa > 1:4077191/1‑52 (MQ=255) ggACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg > 1:853518/1‑70 (MQ=255) aaataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:2685479‑M1/30‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTaaa < 1:3241088‑M1/16‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATc > 1:3089399‑M1/22‑45 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:469980‑M1/22‑47 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa < 1:981460‑M1/28‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:3824017‑M1/30‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:2806428‑M1/30‑1 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAtga < 1:1718658‑M1/33‑2 (MQ=255) aataaaattaaaatgttataaGTCGAGATTAAGAAAACCGGAATCTGAAGATg > 1:1187807‑M1/22‑53 (MQ=255) ataaaattaaaatgttataaGTCGAGATTAAGTAAACCg < 1:2605750‑M1/19‑1 (MQ=255) ataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:1349237‑M1/21‑46 (MQ=255) ataaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3206933‑M1/21‑48 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:4354201‑M1/20‑45 (MQ=255) taaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:1348346‑M1/20‑45 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAAt < 1:3670622‑M1/23‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAAt < 1:844888‑M1/23‑1 (MQ=255) aaaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:1245076‑M1/30‑1 (MQ=255) tGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTc > 1:3231955/1‑64 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCgg < 1:3889728‑M1/20‑1 (MQ=255) aaattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:243183‑M1/30‑1 (MQ=255) gCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAAt > 1:3892830/1‑39 (MQ=255) gCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTacac > 1:3626278/1‑69 (MQ=255) aattaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:2389824‑M1/17‑44 (MQ=255) attaatatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:1629783‑M1/16‑41 (MQ=255) attaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3591509‑M1/16‑43 (MQ=255) attaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGa > 1:1853246‑M1/16‑42 (MQ=255) attaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGa > 1:1266552‑M1/16‑42 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTg > 1:2165504‑M1/15‑40 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGa < 1:390598‑M1/27‑1 (MQ=255) ttaaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa > 1:1958506‑M1/15‑44 (MQ=255) gTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGc < 1:443577/71‑1 (MQ=255) taaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGaa > 1:1608817‑M1/14‑41 (MQ=255) tCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCg < 1:2213795/61‑1 (MQ=255) aaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:2693837‑M1/30‑1 (MQ=255) aaaatgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:2216378‑M1/30‑1 (MQ=255) cTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3393284/1‑39 (MQ=255) cTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGaa > 1:3941068/1‑39 (MQ=255) atgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGAt < 1:1972367‑M1/31‑1 (MQ=255) tgttataaGTCGAGATTAAGTAAACCGGAATCTGAAGa < 1:4280203‑M1/30‑1 (MQ=255) ttCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGc > 1:3885881/1‑70 (MQ=255) gtgtCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGCACAGc < 1:500901/70‑1 (MQ=255) gtgtCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGCACAGc > 1:1605753/1‑70 (MQ=255) aaGTCGAGATTAAGTAAACCGGAATCTGAAGAtga < 1:1364864‑M1/33‑2 (MQ=255) tgtCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGCACAGCg < 1:3446425/70‑1 (MQ=255) | GCGACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGATTCTTGTGTCGAGATTAAGTAAACCGGAATCTGAAGATGTCTGAACCACGTTTCGTACACCTGCGGGTGCACAGCG > W3110S.gb/205027‑205165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |