| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 205097 = | 42 (0.880) | 58 (1.650) +TTATAACATTTTA |
15/76 | NT | 64.0% | intergenic (+8/‑29) | rnhB/dnaE | ribonuclease HII, degrades RNA of DNA‑RNA hybrids/DNA polymerase III alpha subunit |
| ? | W3110S.gb | 4139149 = | 46 (0.970) | coding (2/1023 nt) | frlB | fructoselysine‑6‑P‑deglycase | |||||
Only 100 of 134 total aligned reads displayed.
CTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGTAA > W3110S.gb/4139081‑4139219 | cTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACat > 1:655822/1‑70 (MQ=255) tttCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACatttta > 1:2284210/1‑71 (MQ=255) tttCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACatttta > 1:793560/1‑71 (MQ=255) cACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattttattt < 1:4097789/70‑1 (MQ=255) ttCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattt < 1:3948640/62‑1 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattttatttt > 1:919629/1‑66 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattttatttt > 1:3991586/1‑66 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTtctc > 1:1396947/1‑69 (MQ=255) ccATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTtctc < 1:3760931/63‑1 (MQ=255) ccATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAAc < 1:2823436/71‑1 (MQ=255) ccATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAAc < 1:3786305/71‑1 (MQ=255) ggtcatcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:2818490‑M2/49‑63 (MQ=255) ggtcatcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:3589929‑M2/49‑63 (MQ=255) ggtcatcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:3671014‑M2/49‑63 (MQ=255) atatTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACAt < 1:588447/71‑1 (MQ=255) ttttCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTAc > 1:278381/1‑71 (MQ=255) catcttcagattccggttttcttaatctcgacttataacattttaattttatt > 1:1187807‑M2/46‑53 (MQ=255) catcttcagattccggtttacttaatctcgacttataacattttaattttatt > 1:2125531‑M2/46‑53 (MQ=255) catcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTTCtccatta > 1:2038406‑M2/46‑60 (MQ=255) ttCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAAc > 1:2742691/1‑64 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaattttattt < 1:2897097‑M2/9‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaattttattt < 1:2685479‑M2/9‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaattttatt < 1:3824017‑M2/8‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaatttt < 1:1245076‑M2/5‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaattt < 1:243183‑M2/4‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaa > 1:1958506‑M2/44‑44 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTtc < 1:1745387‑M2/11‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTTCTccatt < 1:2552015‑M2/17‑3 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTTCTcc < 1:376075‑M2/14‑1 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaattttatttt > 1:347948‑M2/42‑51 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaattttatttt > 1:4422833‑M2/42‑51 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaattttatt < 1:981460‑M2/8‑1 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaattttat > 1:3206933‑M2/42‑48 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaattt < 1:895121‑M2/4‑1 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaatt > 1:2389824‑M2/42‑44 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaat > 1:3099712‑M2/42‑43 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaat > 1:3591509‑M2/42‑43 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaATTTTATTTtc > 1:1221798‑M2/42‑52 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaATTTTATTTTCTCcat < 1:3251255‑M2/16‑2 (MQ=255) ttcagattacggtttacttaatctcgacttataacattttaattttatttt > 1:15420‑M2/42‑51 (MQ=255) tcagattccggtttacttaatctcgacttataacattttaattttatttt > 1:2200183‑M2/41‑50 (MQ=255) tcagattccggtttacttaatctcgacttataacattttaat > 1:1853246‑M2/41‑42 (MQ=255) tcagattccggtttacttaatctcgacttataacattttaat > 1:1266552‑M2/41‑42 (MQ=255) tcagattccggtttacttaatctcgacttataacattttaa < 1:390598‑M2/1‑1 (MQ=255) cagattccggtttacttaatctcgacttataacattttaattttatt > 1:469980‑M2/40‑47 (MQ=255) cagattccggtttacttaatctcgacttataacattttaattttat > 1:1349237‑M2/40‑46 (MQ=255) cagattccggtttacttaatctcgacttataacattttaatttta > 1:4354201‑M2/40‑45 (MQ=255) cagattccggtttacttaatctcgacttataacattttaatttta > 1:1348346‑M2/40‑45 (MQ=255) cagattccggtttacttaatctcgacttataacattttaatt > 1:577657‑M2/40‑42 (MQ=255) cagattccggtttacttaatctcgacttataacattttaa > 1:2165504‑M2/40‑40 (MQ=255) cagattccggtttacttaatctcgacttataacatattaat > 1:1629783‑M2/40‑41 (MQ=255) gattccggtttacttaatctcgacttataacattttaATTTTATTTtc < 1:2433816‑M2/11‑1 (MQ=255) gACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAAc < 1:597150/58‑1 (MQ=255) gACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGc > 1:2617618/1‑71 (MQ=255) gACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGc > 1:357958/1‑71 (MQ=255) attccggtttacttaatctcgacttataacattttaatttt < 1:3670622‑M2/5‑1 (MQ=255) tccggtttacttaatctcgacttataacattttaattttatt < 1:1782568‑M2/8‑1 (MQ=255) cAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt < 1:3972438/71‑1 (MQ=255) cAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt > 1:2946800/1‑71 (MQ=255) ccggtttacttaatctcgacttataacattttaattt < 1:3889728‑M2/4‑1 (MQ=255) ccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:132835‑M2/34‑48 (MQ=255) aGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt > 1:3172430/1‑70 (MQ=255) cggtttacataatctcgacttataacattttaATTTTATTTTCTcc > 1:935439‑M2/33‑46 (MQ=255) aaaGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGa > 1:1294639/1‑70 (MQ=255) aaaGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAg > 1:3932106/1‑71 (MQ=255) gtttacttaatctcgacttataacattttaATTTTATTTTCTccatt < 1:1258400‑M2/17‑3 (MQ=255) gtttacttaatctcgacttataacattttaATTTTATTTTCTccatt < 1:188698‑M2/17‑3 (MQ=255) tttacttaatctcgacttataacattttaattttatt < 1:3241088‑M2/8‑1 (MQ=255) tttacttaatctcgacttataacattttaATTTTATTTTCTccatt < 1:2296901‑M2/17‑3 (MQ=255) tttacttaatctcgacttataacattttaATTTTATTTTCTCcat < 1:3843933‑M2/16‑2 (MQ=255) ttacttaatctcgacttataacattttaATTTTATTTTCTccatt < 1:2136620‑M2/17‑3 (MQ=255) tacttaatctcgacttataacattttaattttatttt > 1:4070488‑M2/28‑37 (MQ=255) tacttaatctcgacttataacattttaattttatttt > 1:1943860‑M2/28‑37 (MQ=255) tCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCa < 1:2689515/42‑1 (MQ=255) tCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTgg > 1:1827986/1‑71 (MQ=255) ccACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggc > 1:2601300/1‑71 (MQ=255) acttaatctcgacttataacattttaATTTTATtttctcat > 1:2599792‑M2/27‑39 (MQ=255) cACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAAAATTACGACAAAGCGTTGAGCTggcg > 1:2164701/1‑71 (MQ=255) ttaatctcgacttataacattttaATTTTATTTtctc < 1:3703937‑M2/13‑1 (MQ=255) ttaatctcgacttataacattttaATTTTATTTtctc < 1:4175247‑M2/13‑1 (MQ=255) aCGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCTTTGAGCTggcgg > 1:3363903/1‑71 (MQ=255) taatctcgacttataacattttaATTTTATTTTCTccatt < 1:1796686‑M2/17‑3 (MQ=255) cGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCa > 1:1430855/1‑38 (MQ=255) cGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggcggc < 1:856674/71‑1 (MQ=255) ggTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGc < 1:2419531/56‑1 (MQ=255) gTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGc < 1:4212889/55‑1 (MQ=255) tctcgacttataacattttaATTTTATTTTCTCcat < 1:3752173‑M2/16‑2 (MQ=255) tGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt < 1:293929/57‑1 (MQ=255) ctcgacttataacattttaATTTTATTTTCTCcat < 1:1614367‑M2/16‑2 (MQ=255) tCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt > 1:1624163/1‑49 (MQ=255) tatCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt < 1:4420885/45‑1 (MQ=255) tatCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt < 1:825097/45‑1 (MQ=255) tatCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGa < 1:3402995/71‑1 (MQ=255) tCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAg > 1:1875618/1‑71 (MQ=255) ccAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCt < 1:1840575/54‑1 (MQ=255) cAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggcgg > 1:2730765/1‑51 (MQ=255) aCATTTTATTTTCTCCAGATAACATTACGAGAAAGc < 1:4258315/36‑1 (MQ=255) cATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGACGGCGTa < 1:3561/71‑1 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGt > 1:2129576/1‑69 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGTaa < 1:1879444/71‑1 (MQ=255) | CTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGTAA > W3110S.gb/4139081‑4139219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |