| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 5 (0.100) | 23 (0.550) +ATGCGGT |
13/86 | NT | 55.4% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | = 3997968 | 38 (0.780) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2564206‑2564137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCGT < W3110S.gb/3997968‑3997949 ||||||| CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA > 1:2654533/1‑71CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA < 1:4154406/71‑1 TTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATG < 1:4472957/71‑1 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGC < 1:4591255/70‑1 TACGCGTCTTTTTGGCGGATCGGTTGTGCCGGTGACAGTGAAATCACTCGCATTTCCTTCCTGAATGCGG > 1:556808/1‑70 CGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT < 1:4581569/71‑1 CGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT < 1:3344441/71‑1 GCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATT < 1:2837936/71‑1 CCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTC < 1:3444732/71‑1 CTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCG > 1:942593/1‑71 CTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATT > 1:2670357/1‑67 TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA > 1:2015421/1‑64 TTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAG > 1:3562488/1‑71 TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGC > 1:3663339/1‑71 TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGC > 1:1864429/1‑71 TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAG < 1:2341027/70‑1 TGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG < 1:335786/70‑1 GGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC > 1:2023605/1‑71 GATCGGTTGTGACGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGG < 1:2694612/53‑1 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGG > 1:3001287/1‑67 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtg > 1:915078/1‑69 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtg > 1:961177/1‑69 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtg > 1:2375154/1‑69 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtg > 1:1274071/1‑69 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCA > 1:1976376/1‑59 GTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC < 1:2709968/65‑1 TTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCA < 1:3501583/56‑1 GTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:1773856/1‑58 ACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGgg < 1:615441/51‑3 GGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:989136/54‑2 GTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC < 1:2734792/50‑1 GAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:4518376/1‑50 AAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:3899965/50‑2 TCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG > 1:3063517/1‑40 TCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:4258390/43‑2 TCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:3561208/1‑35 ||||||| CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2564206‑2564137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCGT < W3110S.gb/3997968‑3997949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |