| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 5 (0.100) | 23 (0.550) +ATGCGGT |
13/86 | NT | 55.4% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | = 3997968 | 38 (0.780) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
ACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATG > W3110S.gb/2564067‑2564206 | aCCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCt < 1:4325691/71‑1 (MQ=255) tctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTc < 1:630338/69‑1 (MQ=255) tctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:1343319/1‑71 (MQ=255) tttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCag > 1:1125003/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg > 1:541778/1‑68 (MQ=255) ttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCagg < 1:757546/68‑1 (MQ=255) tACATCCTTAAACTGATATACATT‑CCGAACAATGTGCTCTTTAGTTTCATAAGTCGTTCCCTCaggaagaa > 1:3315068/1‑69 (MQ=255) cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga < 1:3436084/69‑2 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCa > 1:777143/1‑59 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCACTCaggaaga > 1:1421195/1‑50 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag < 1:1825097/49‑1 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag < 1:3820478/48‑1 (MQ=255) cagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:915078‑M1/28‑71 (MQ=255) cagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:961177‑M1/28‑71 (MQ=255) cagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:2375154‑M1/28‑71 (MQ=255) cagcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:1274071‑M1/28‑71 (MQ=255) agcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGa < 1:4258390‑M1/17‑1 (MQ=255) agcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGAttt < 1:3899965‑M1/24‑1 (MQ=255) agcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTtcacc < 1:989136‑M1/28‑1 (MQ=255) gcgccaccgctggcgaataccgcatTCaggaagga > 1:3561208‑M1/26‑35 (MQ=255) gcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTtcaccgtcac > 1:1773856‑M1/26‑58 (MQ=255) gcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTtc > 1:4518376‑M1/26‑50 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTtcac < 1:2734792‑M1/27‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAc < 1:2709968‑M1/42‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc > 1:2023605‑M1/24‑71 (MQ=255) ccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa > 1:3001287‑M1/23‑67 (MQ=255) ccccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTtcaccgt < 1:615441‑M1/30‑1 (MQ=255) ccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGa > 1:3063517‑M1/20‑40 (MQ=255) cgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa < 1:335786‑M1/52‑1 (MQ=255) gctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:3663339‑M1/18‑71 (MQ=255) gctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:1864429‑M1/18‑71 (MQ=255) ctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaa > 1:3562488‑M1/17‑71 (MQ=255) ctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa < 1:2341027‑M1/54‑1 (MQ=255) tggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACaa < 1:3501583‑M1/41‑1 (MQ=255) tggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCg > 1:1976376‑M1/16‑59 (MQ=255) cgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAagag > 1:942593‑M1/13‑71 (MQ=255) gaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAgg < 1:3444732‑M1/60‑1 (MQ=255) aataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAag > 1:2670357‑M1/11‑67 (MQ=255) aataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGc < 1:2837936‑M1/61‑1 (MQ=255) ataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCg < 1:4581569‑M1/62‑1 (MQ=255) ataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCg < 1:3344441‑M1/62‑1 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:2015421‑M1/9‑64 (MQ=255) ccgcatTCAGGAAGGAAATGCGAGTGATTTCACTGTCACCGGCACAACCGATCCGCCAAAAAGACGCGTa > 1:556808‑M1/7‑70 (MQ=255) ccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGTCACAACCGATc < 1:2694612‑M1/47‑1 (MQ=255) gcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc < 1:4591255‑M1/66‑1 (MQ=255) catTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCaa < 1:4472957‑M1/68‑1 (MQ=255) tTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATg < 1:4154406‑M1/70‑1 (MQ=255) tTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATg > 1:2654533‑M1/2‑71 (MQ=255) | ACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATG > W3110S.gb/2564067‑2564206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |