| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 5 (0.100) | 23 (0.550) +ATGCGGT |
13/86 | NT | 55.4% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | = 3997968 | 38 (0.780) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
CTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > W3110S.gb/3997901‑3998037 | cTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTc > 1:2549113/1‑71 (MQ=255) tGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcg > 1:2966026/1‑71 (MQ=255) gCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgccacgcca > 1:2129305/1‑70 (MQ=255) gCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgccacgcca > 1:1418891/1‑70 (MQ=255) gCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAAcgc > 1:2537024/1‑71 (MQ=255) gACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCgg < 1:2185658/71‑1 (MQ=255) cgTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTa < 1:3264176/71‑1 (MQ=255) gtggtgGTAAAGCGCCAGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTa > 1:1598722/1‑70 (MQ=255) gtggtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAg < 1:4108472/70‑1 (MQ=255) tggtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCaa < 1:3455757/51‑1 (MQ=255) aGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGc > 1:4376575/1‑71 (MQ=255) gcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:1645067/71‑1 (MQ=255) gcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:2192954/71‑1 (MQ=255) cccGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt > 1:2508230/1‑70 (MQ=255) cccGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:1386909/70‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTg > 1:2161393/1‑69 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAAcgc > 1:4596958/1‑42 (MQ=255) aCTACGCGCCACCGCTGGCGAATGTCGCCACGCCaaa < 1:3185091/37‑1 (MQ=255) aCTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATc < 1:2743059/71‑1 (MQ=255) cTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATc > 1:1077792/1‑70 (MQ=255) tACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCtt < 1:1398625/62‑1 (MQ=255) cagcgccaCCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:1274071‑M2/3‑20 (MQ=255) cagcgccaCCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:915078‑M2/3‑20 (MQ=255) cagcgccaCCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:2375154‑M2/3‑20 (MQ=255) cagcgccaCCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:961177‑M2/3‑20 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCt > 1:2802268/1‑68 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTAt < 1:3498366/70‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:4369534/1‑71 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:4586655/1‑71 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:525609/1‑71 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcacc < 1:989136‑M2/53‑36 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgattt < 1:3899965‑M2/49‑32 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcga < 1:4258390‑M2/42‑25 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcac > 1:1773856‑M2/1‑18 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttc > 1:4518376‑M2/1‑18 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaagga > 1:3561208‑M2/1‑18 (MQ=255) cgcCACCGGTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:2675479/1‑69 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatcc > 1:2023605‑M2/1‑16 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaac < 1:2709968‑M2/65‑50 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcac < 1:2734792‑M2/50‑35 (MQ=255) ccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccga > 1:3001287‑M2/1‑15 (MQ=255) ccACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg > 1:3045707/1‑71 (MQ=255) ccACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:3348444/71‑1 (MQ=255) ccACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAg > 1:2616009/1‑70 (MQ=255) ccccgcTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgt < 1:615441‑M2/49‑38 (MQ=255) cACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGa > 1:1473978/1‑58 (MQ=255) cACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg > 1:2555522/1‑70 (MQ=255) aCCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTa > 1:1173071/1‑71 (MQ=255) ccGCTGGCGAATaccgcattcaggaaggaaatgcgagtga > 1:3063517‑M2/1‑12 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca < 1:335786‑M2/70‑60 (MQ=255) cGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACg > 1:1528628/1‑71 (MQ=255) cGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACg > 1:1975272/1‑71 (MQ=255) gCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:1864429‑M2/1‑10 (MQ=255) gCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:3663339‑M2/1‑10 (MQ=255) cTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaa > 1:3562488‑M2/1‑9 (MQ=255) cTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa < 1:2341027‑M2/70‑62 (MQ=255) cTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:2603622/51‑1 (MQ=255) tGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:1976376‑M2/1‑8 (MQ=255) tGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaa < 1:3501583‑M2/56‑49 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCa < 1:3868841/69‑1 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCa < 1:1755212/69‑1 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAgt > 1:2630617/1‑71 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAg < 1:4039770/70‑1 (MQ=255) cGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagag > 1:942593‑M2/1‑5 (MQ=255) gAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagagg < 1:3444732‑M2/71‑68 (MQ=255) gAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTg < 1:1917669/47‑1 (MQ=255) gAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:2882855/60‑1 (MQ=255) aaTaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggc < 1:2837936‑M2/71‑69 (MQ=255) aaTaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaag > 1:2670357‑M2/1‑3 (MQ=255) aTaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcg < 1:4581569‑M2/71‑70 (MQ=255) aTaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcg < 1:3344441‑M2/71‑70 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGtaa < 1:3137313/71‑1 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGtaa < 1:3615148/71‑1 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGtaa < 1:1135670/71‑1 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaa > 1:2015421‑M2/1‑1 (MQ=255) tGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:1619120/43‑1 (MQ=255) tGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg < 1:2394775/53‑1 (MQ=255) tGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg < 1:1237598/53‑1 (MQ=255) | CTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > W3110S.gb/3997901‑3998037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |