| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1712410 = | 66 (0.960) | 5 (0.080) | 3/90 | NT | 8.9% | coding (3022/3282 nt) | yphG | conserved hypothetical protein |
| ? | minE | 1712433 = | 45 (0.760) | coding (2999/3282 nt) | yphG | conserved hypothetical protein | |||||
CTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1712483‑1712410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacagtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCT > minE/1712433‑1712502 CTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAA > 1:824863/1‑70CTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAA > 1:2931500/1‑70CTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAA > 1:2728470/1‑70CTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAA > 1:1871485/1‑70CTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGA < 1:254559/68‑1 GCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGT < 1:2604160/71‑1 GCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGT > 1:894318/1‑71 GCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGT > 1:2643901/1‑71 GCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGT < 1:2641405/71‑1 GCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACA < 1:1181615/69‑1 GGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAATTGAAA < 1:1713648/62‑1 GAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGT < 1:3216285/43‑1 CAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACA > 1:2437492/1‑38 GCAACTGTTTAGTGAAATGAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAG < 1:2520050/52‑1 GCAACTGTTTAGTGAAATGAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAG < 1:1099409/52‑1 GCAACTGTTTAGTGAAATGAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAG < 1:3404105/52‑1 CTGTTTAGTGAAATGAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGC > 1:2247337/1‑70 TGTTTAGTGAAATGAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGC > 1:3055857/1‑69 AAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCTGAAGAGATAATCA > 1:1592558/1‑70 AAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAA > 1:1718890/1‑71 AACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCA < 1:2927869/69‑1 AGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGG < 1:211426/71‑1 TTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCGACCGGCT > 1:489133/1‑71 TTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCT > 1:2051023/1‑71 TTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCT > 1:3813748/1‑71 CTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1712483‑1712410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacagtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCT > minE/1712433‑1712502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |