| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1712410 = | 66 (0.960) | 5 (0.080) | 3/90 | NT | 8.9% | coding (3022/3282 nt) | yphG | conserved hypothetical protein |
| ? | minE | 1712433 = | 45 (0.760) | coding (2999/3282 nt) | yphG | conserved hypothetical protein | |||||
GGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCT > minE/1712363‑1712502 | ggCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGtt > 1:3309942/1‑71 (MQ=255)ggCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGtt > 1:3908283/1‑71 (MQ=255) aaaGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGc > 1:1536526/1‑70 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGc < 1:2461369/68‑1 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCtgt > 1:1794549/1‑71 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCtgt > 1:2080855/1‑71 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCtgt > 1:2685194/1‑71 (MQ=255) aaaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGc > 1:4075402/1‑71 (MQ=255) aaaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGc > 1:2476136/1‑71 (MQ=255) aaaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGc > 1:326692/1‑71 (MQ=255) aaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCg < 1:2512451/71‑1 (MQ=255) aaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCg < 1:1303188/71‑1 (MQ=255) aTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCgg > 1:1094056/1‑71 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGttt < 1:3318532/71‑1 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGtt < 1:3040159/70‑1 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGtt < 1:1623559/70‑1 (MQ=255) gCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:1876075/71‑1 (MQ=255) cTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgt < 1:1909008/71‑1 (MQ=255) cTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:3789826/70‑1 (MQ=255) ttCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:3294709/69‑1 (MQ=255) tACTGGTTTTAGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCg < 1:1741072/71‑1 (MQ=255) ctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACAGTTGc < 1:3404105‑M1/26‑1 (MQ=255) ctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACAGTTGc < 1:1099409‑M1/26‑1 (MQ=255) ctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACAGTTGc < 1:2520050‑M1/26‑1 (MQ=255) cTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGcc < 1:188974/71‑1 (MQ=255) ggTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgtt > 1:3464967/1‑62 (MQ=255) ggTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgtt > 1:2592986/1‑62 (MQ=255) ggTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGcc > 1:3379299/1‑69 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcag < 1:3139924/71‑1 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcag < 1:1939609/71‑1 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcag < 1:2394591/71‑1 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCca < 1:3371539/70‑1 (MQ=255) ttttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCgg < 1:1218893/54‑1 (MQ=255) ttttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCgg < 1:3974592/54‑1 (MQ=255) ttttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcagc < 1:614626/71‑1 (MQ=255) ttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTgttgtt > 1:1543545/1‑61 (MQ=255) ttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcagcag > 1:3321507/1‑71 (MQ=255) ccATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGc < 1:2426313/71‑1 (MQ=255) cATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCa < 1:947151/71‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:2987538/52‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:1687175/52‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:4031363/52‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:1028697/52‑1 (MQ=255) ctctTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTtgttgt < 1:3772979/52‑1 (MQ=255) ttGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCa > 1:2826427/1‑71 (MQ=255) gcaactgtttagtgaaatgaaacagtTGCTGTGCGGTTTGTTGTTCGCCcag < 1:3404105‑M2/26‑1 (MQ=255) gcaactgtttagtgaaatgaaacagtTGCTGTGCGGTTTGTTGTTCGCCcag < 1:2520050‑M2/26‑1 (MQ=255) gcaactgtttagtgaaatgaaacagtTGCTGTGCGGTTTGTTGTTCGCCcag < 1:1099409‑M2/26‑1 (MQ=255) cACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:742692/38‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTc < 1:3216285‑M1/43‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc > 1:894318‑M1/1‑71 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc < 1:2604160‑M1/71‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc < 1:2641405‑M1/71‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc > 1:2643901‑M1/1‑71 (MQ=255) ctgtttagtgaaatgaaacagtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc > 1:2247337‑M2/23‑70 (MQ=255) tgtttagtgaaatgaaacagtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc > 1:3055857‑M2/22‑69 (MQ=255) TGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg > 1:2437492‑M1/1‑38 (MQ=255) TGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc < 1:1181615‑M1/69‑1 (MQ=255) TTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCag > 1:1871485‑M1/1‑70 (MQ=255) TTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCag > 1:2728470‑M1/1‑70 (MQ=255) TTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCag > 1:824863‑M1/1‑70 (MQ=255) TTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCag > 1:2931500‑M1/1‑70 (MQ=255) TTTCAATTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATcc < 1:1713648‑M1/62‑1 (MQ=255) TCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCag < 1:254559‑M1/68‑1 (MQ=255) catttcaCTAAACAGTTGCTGTTCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCagaa > 1:3482880/1‑69 (MQ=255) catttcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGt > 1:2362698/1‑46 (MQ=255) catttcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCt > 1:1250693/1‑61 (MQ=255) catttcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCt > 1:1275295/1‑61 (MQ=255) atttcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCagaa > 1:3328169/1‑68 (MQ=255) tttcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCa > 1:1211665/1‑48 (MQ=255) tcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGAt > 1:2779134/1‑70 (MQ=255) tcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGAt > 1:1139937/1‑70 (MQ=255) tcaCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGAt > 1:3412477/1‑70 (MQ=255) gaCTAAACATTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATa < 1:4002374/69‑1 (MQ=255) caCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATaa > 1:2526814/1‑71 (MQ=255) caCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATa < 1:1088735/70‑1 (MQ=255) caCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATa < 1:1299088/70‑1 (MQ=255) caCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATa < 1:1424877/70‑1 (MQ=255) aCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATaa < 1:2510521/70‑1 (MQ=255) aCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATaa < 1:1171751/70‑1 (MQ=255) aCTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATaa > 1:2363936/1‑70 (MQ=255) cTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCaga > 1:2799161/1‑61 (MQ=255) cTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCaga > 1:111442/1‑61 (MQ=255) cTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATc < 1:362018/71‑1 (MQ=255) cTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATc < 1:1808913/71‑1 (MQ=255) aaacagtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCTGAAGAGATAATCa > 1:1592558‑M2/8‑70 (MQ=255) aaacagtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCaa > 1:1718890‑M2/8‑71 (MQ=255) aacagtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCa < 1:2927869‑M2/63‑1 (MQ=255) agtTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCgg < 1:211426‑M2/68‑1 (MQ=255) tTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCGACCGGCt > 1:489133‑M2/2‑71 (MQ=255) tTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCt > 1:3813748‑M2/2‑71 (MQ=255) tTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCt > 1:2051023‑M2/2‑71 (MQ=255) tGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCt > 1:1123202/1‑70 (MQ=255) | GGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGCCAGAAGAGATAATCAACCGGCT > minE/1712363‑1712502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |