| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1712410 = | 66 (0.960) | 5 (0.080) | 3/90 | NT | 8.9% | coding (3022/3282 nt) | yphG | conserved hypothetical protein |
| ? | minE | 1712433 = | 45 (0.760) | coding (2999/3282 nt) | yphG | conserved hypothetical protein | |||||
GACAACAAGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGC > minE/1712340‑1712480 | gACAACAAGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCa > 1:3981722/1‑71 (MQ=255)gACAACAAGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCa > 1:4055710/1‑71 (MQ=255)gACAACAAGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCa < 1:3997787/71‑1 (MQ=255)agccggttgattatctcttctggcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaa > 1:2051023‑M1/71‑71 (MQ=255)agccggttgattatctcttctggcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaa > 1:3813748‑M1/71‑71 (MQ=255)agccggtcgattatctcttctggcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaa > 1:489133‑M1/71‑71 (MQ=255) ccggttgattatctcttctggcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaACt < 1:211426‑M1/3‑1 (MQ=255) caacaaGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACt > 1:2595649/1‑71 (MQ=255) ttgattatctcttctggcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaACTGttt > 1:1718890‑M1/65‑71 (MQ=255) aaGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGttt < 1:2999478/71‑1 (MQ=255) aaGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATAATGGTTTTCGCCATCTCTTGCGCCCACTGttt < 1:1316739/71‑1 (MQ=255) tgattatctcttctggcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaACTGtt < 1:2927869‑M1/6‑1 (MQ=255) tgattatctcttcaggcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaACTGttt > 1:1592558‑M1/64‑70 (MQ=255) aGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGtttc < 1:1386794/71‑1 (MQ=255) tCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGtttcat < 1:2358311/71‑1 (MQ=255) cAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCa > 1:1816463/1‑61 (MQ=255) aGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGtttcattt < 1:3882578/71‑1 (MQ=255) aGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGtttcattt < 1:2836060/71‑1 (MQ=255) gTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGtttcatttca > 1:1374680/1‑71 (MQ=255) ttGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGttt < 1:3780933/63‑1 (MQ=255) tGCGAGACGGCAAAGAAATCCGCTTCGATTCTGGTTTTCGCCATCTCTTGCGCCCACTGttt > 1:3480493/1‑62 (MQ=255) tGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGtt > 1:3553697/1‑61 (MQ=255) tGCGAGACGGCAAAGAAATCCACTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCAc > 1:1132760/1‑70 (MQ=255) gCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACt > 1:1074441/1‑70 (MQ=255) gCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACt > 1:3059909/1‑70 (MQ=255) gCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACt > 1:1483360/1‑70 (MQ=255) cGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTaa < 1:566416/71‑1 (MQ=255) gagaCGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTaaa > 1:250685/1‑71 (MQ=255) gagaCGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTaaa < 1:1018317/71‑1 (MQ=255) agaCGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAAc < 1:1662933/71‑1 (MQ=255) gcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACa > 1:3055857‑M1/49‑69 (MQ=255) gcaagggatggcgctgcgactgctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACAg > 1:2247337‑M1/49‑70 (MQ=255) ggCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGtt > 1:3908283/1‑71 (MQ=255) ggCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGtt > 1:3309942/1‑71 (MQ=255) aaaGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCa > 1:1845794/1‑45 (MQ=255) aaaGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCa > 1:3120099/1‑45 (MQ=255) aaaGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGc > 1:1536526/1‑70 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGc < 1:2461369/68‑1 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCtgt > 1:2080855/1‑71 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCtgt > 1:2685194/1‑71 (MQ=255) aGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCtgt > 1:1794549/1‑71 (MQ=255) aaaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGc > 1:2476136/1‑71 (MQ=255) aaaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGc > 1:326692/1‑71 (MQ=255) aaaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGc > 1:4075402/1‑71 (MQ=255) aaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTaaa > 1:2574270/1‑58 (MQ=255) aaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCg < 1:2512451/71‑1 (MQ=255) aaTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCg < 1:1303188/71‑1 (MQ=255) aTCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCgg > 1:1094056/1‑71 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACa > 1:3155436/1‑56 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACa > 1:380122/1‑56 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGttt < 1:3318532/71‑1 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGtt < 1:1623559/70‑1 (MQ=255) cGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGtt < 1:3040159/70‑1 (MQ=255) gCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:1876075/71‑1 (MQ=255) cTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgt < 1:1909008/71‑1 (MQ=255) cTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:3789826/70‑1 (MQ=255) ttCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:3294709/69‑1 (MQ=255) tACTGGTTTTAGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCg < 1:1741072/71‑1 (MQ=255) ctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACAGTTGc < 1:2520050‑M1/26‑1 (MQ=255) ctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACAGTTGc < 1:3404105‑M1/26‑1 (MQ=255) ctgggcgaacaacaaaccgcacagcaACTGTTTCATTTCACTAAACAGTTGc < 1:1099409‑M1/26‑1 (MQ=255) cTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGcc < 1:188974/71‑1 (MQ=255) ggTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgtt > 1:3464967/1‑62 (MQ=255) ggTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgtt > 1:2592986/1‑62 (MQ=255) ggTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGcc > 1:3379299/1‑69 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAAc < 1:3790244/42‑1 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAg > 1:1815638/1‑44 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcag < 1:2394591/71‑1 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcag < 1:3139924/71‑1 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcag < 1:1939609/71‑1 (MQ=255) gTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCca < 1:3371539/70‑1 (MQ=255) ttttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCgg < 1:3974592/54‑1 (MQ=255) ttttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCgg < 1:1218893/54‑1 (MQ=255) ttttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcagc < 1:614626/71‑1 (MQ=255) ttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTaa > 1:1420897/1‑37 (MQ=255) ttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTgttgtt > 1:1543545/1‑61 (MQ=255) ttCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCcagcag > 1:3321507/1‑71 (MQ=255) ccATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGc < 1:2426313/71‑1 (MQ=255) cATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCa < 1:947151/71‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:4031363/52‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:1028697/52‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:2987538/52‑1 (MQ=255) tctcTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttgttg < 1:1687175/52‑1 (MQ=255) ctctTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTtgttgt < 1:3772979/52‑1 (MQ=255) ttGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCa > 1:2826427/1‑71 (MQ=255) cACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTttg < 1:742692/38‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTc < 1:3216285‑M1/43‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc > 1:2643901‑M1/1‑71 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc < 1:2641405‑M1/71‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc < 1:2604160‑M1/71‑1 (MQ=255) ACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGc > 1:894318‑M1/1‑71 (MQ=255) | GACAACAAGTCAGGTTGCGAGACGGCAAAGAAATCCGCTTCGATACTGGTTTTCGCCATCTCTTGCGCCCACTGTTTCATTTCACTAAACAGTTGCTGTGCGGTTTGTTGTTCGCCCAGCAGTCGCAGCGCCATCCCTTGC > minE/1712340‑1712480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |