| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 436833 | 100 (1.450) | 62 (0.900) | 37/104 | NT | 40.4% | coding (546/546 nt) | seqA | regulatory protein for replication initiation |
| ? | minE | 1803907 = | 83 (1.200) | intergenic (+63/‑28) | ygaH/mprA | predicted inner membrane protein/DNA‑binding transcriptional regulator | |||||
Only 100 of 204 total aligned reads displayed.
TGATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCACAACAGAGTGAT > minE/436763‑436903 | tGATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTaa < 1:2194267/71‑1 (MQ=255)tGATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTaa < 1:4013872/71‑1 (MQ=255) cGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggc > 1:2938422‑M1/1‑67 (MQ=255) cGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggc > 1:631197‑M1/1‑67 (MQ=255) cGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACg > 1:503715/1‑71 (MQ=255) gAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACg < 1:3282340/70‑1 (MQ=255) aaCACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGtt > 1:1107269/1‑71 (MQ=255) aaCACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGtt > 1:225783/1‑71 (MQ=255) acacATCATGCAGTCGATTCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTg > 1:1406305/1‑71 (MQ=255) catcatGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaat < 1:1560985‑M1/71‑11 (MQ=255) tcatGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgac < 1:2697975/71‑1 (MQ=255) catGCAGTCGATGCAATTCCCGGCTGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaa > 1:2161441‑M1/1‑58 (MQ=255) atGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaat > 1:41784‑M1/1‑57 (MQ=255) atGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgaca < 1:2510111/70‑1 (MQ=255) cAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgag > 1:2841274‑M1/1‑54 (MQ=255) cAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaag > 1:2168369/1‑70 (MQ=255) aGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaatt < 1:2442606‑M1/64‑12 (MQ=255) gTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaaggac < 1:3356998/71‑1 (MQ=255) tCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatg < 1:2879337‑M1/66‑16 (MQ=255) gATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaaggacaa < 1:2489111/70‑1 (MQ=255) tGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTaaaa > 1:3918134/1‑49 (MQ=255) cAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTaaaa > 1:1236537/1‑47 (MQ=255) cAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTaaaa > 1:1426366/1‑47 (MQ=255) cAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCa < 1:345528/70‑1 (MQ=255) aaTTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaatt < 1:2357064‑M1/55‑12 (MQ=255) aaTTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAAt < 1:152819/71‑1 (MQ=255) aTTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaa < 1:1345783/57‑1 (MQ=255) ttCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTaa < 1:1070750/42‑1 (MQ=255) ttCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcat > 1:444051‑M1/1‑42 (MQ=255) ttCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATgg > 1:3392487/1‑71 (MQ=255) tCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTaaaa > 1:910117/1‑43 (MQ=255) tCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaat > 1:3672556‑M1/1‑41 (MQ=255) tCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaag > 1:2384689/1‑57 (MQ=255) cccGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatg > 1:255917‑M1/1‑40 (MQ=255) cccGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatg > 1:1136011‑M1/1‑40 (MQ=255) ccGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaa < 1:1724490‑M1/67‑29 (MQ=255) ggcggAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaa > 1:3694871‑M1/1‑37 (MQ=255) cggAATTGATTGAGAAGGTTTGCGGAACTATCTaa > 1:2108535/1‑35 (MQ=255) cggAATTGATTGAGAAGGTTTGCGGAACTATCTaa > 1:1116796/1‑35 (MQ=255) cggAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatggatag > 1:2015282‑M1/1‑35 (MQ=255) ggAATTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatggatagt < 1:3950244‑M1/71‑38 (MQ=255) ggAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTg > 1:2869799/1‑41 (MQ=255) gAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgac < 1:3128632/45‑1 (MQ=255) gAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAgac < 1:1156109/45‑1 (MQ=255) aaTTGATTGAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatggatagttc < 1:3557233‑M1/71‑40 (MQ=255) aaTTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACaa < 1:1907428/71‑1 (MQ=255) attgattgAGAAGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatggatagttcg < 1:3327781‑M1/71‑41 (MQ=255) attgattgAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAAt < 1:3621694/58‑1 (MQ=255) attgattgAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAAt < 1:913709/58‑1 (MQ=255) tgattgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAga > 1:1885163/1‑40 (MQ=255) tgattgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAga > 1:3570311/1‑40 (MQ=255) tgattgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATgg > 1:3261982/1‑58 (MQ=255) attgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTg < 1:1046520/71‑1 (MQ=255) attgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTg < 1:1151979/71‑1 (MQ=255) attgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTg > 1:2113648/1‑71 (MQ=255) attgaGAAGGTTTGCGGAACTATCTAAAACGTT‑CAGACAAAGGACAAAGCAATGCCAATCCACAATCGTg < 1:567216/70‑1 (MQ=255) ttgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaagg > 1:1792205/1‑43 (MQ=255) ttgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaagg > 1:3795673/1‑43 (MQ=255) ttgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaagg > 1:1969514/1‑43 (MQ=255) ttgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaagg > 1:3294907/1‑43 (MQ=255) tgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGt > 1:3194300/1‑68 (MQ=255) tgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTg < 1:266756/69‑1 (MQ=255) tgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTg > 1:1685027/1‑69 (MQ=255) tgaGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTg < 1:56320/69‑1 (MQ=255) gagaAGGTTTGCGGAACTATCTAAAACGTTGCAgacaaaggaca < 1:2156333/44‑1 (MQ=255) gagaAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCATAATCGTGCa < 1:2217359/70‑1 (MQ=255) gagaAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAg > 1:3534656/1‑71 (MQ=255) gagaAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAg > 1:3087831/1‑71 (MQ=255) gagaAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAg > 1:4095228/1‑71 (MQ=255) agaAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAgg > 1:485769/1‑71 (MQ=255) agaAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAg < 1:1028678/70‑1 (MQ=255) aaGGTTTGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatggatagttcgtttacgccca > 1:1308454‑M1/1‑21 (MQ=255) tttGCGGAACTATCTAAcggctgaaattaatgaggtcatacccaaatggatagttcgt < 1:2954051‑M1/58‑42 (MQ=255) tttGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCaa < 1:3774769/43‑1 (MQ=255) tttGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCca < 1:1229693/53‑1 (MQ=255) ttGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAAt > 1:228219/1‑56 (MQ=255) ttGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAAt > 1:1672152/1‑56 (MQ=255) ttGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGc > 1:2579392/1‑61 (MQ=255) tGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGc > 1:2629749/1‑45 (MQ=255) tGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTg > 1:3989133/1‑71 (MQ=255) tGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTg > 1:848680/1‑71 (MQ=255) cGGAACTATCTAAcgtctgaaattaatgaggtcatacccaaatggatagttcgt < 1:2200436‑M1/54‑42 (MQ=255) cGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGc > 1:1929042/1‑43 (MQ=255) cGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCa > 1:4032168/1‑59 (MQ=255) aaCTATCTAAcggctgaaattaatgaggtcatacccaaatggatagttcgtttacgcccattgaacaaatg > 1:3880396‑M1/1‑10 (MQ=255) aaCTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCacaa < 1:741177/71‑1 (MQ=255) cTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCacaaca < 1:1995534/71‑1 (MQ=255) tATCTAAcggctgaaattaatgaggtcatacccaaatggatagttcgtttacgcccattgaacaaatgct > 1:4060083‑M1/1‑7 (MQ=255) tATCTAAcggctgaaattaatgaggtcatacccaaatg < 1:2455525‑M1/38‑32 (MQ=255) tATCTAAcggctgaaattaatgaggtcatacccaaatg < 1:3213550‑M1/38‑32 (MQ=255) tATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCa < 1:1829103/58‑1 (MQ=255) tATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCacaaca < 1:696703/70‑1 (MQ=255) aTCTAAcggctgaaattaatgaggtcatacccaaatggatagttcgtttacg > 1:4020503‑M1/1‑6 (MQ=255) aTCTAAcggctgaaattaatgaggtcatacccaaatggatagttcgttta > 1:3702945‑M1/1‑6 (MQ=255) aTCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCacaaca > 1:2363040/1‑69 (MQ=255) tCTAAcggctgaaattaatgaggtcatacccaaatggatagttcgtttacgcccattgaacaaatgctaa > 1:793210‑M1/1‑5 (MQ=255) tCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCACAACag < 1:3133987/69‑1 (MQ=255) aaaaCGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCACAACAGAGtga > 1:2992335/1‑71 (MQ=255) acggctgaaattaatgaggtcatacccaaatggatag > 1:64932‑M1/1‑1 (MQ=255) acggctgaaattaatgaggtcatacccaaatggatag > 1:1921372‑M1/1‑1 (MQ=255) | TGATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAAAACGTTGCAGACAAAGGACAAAGCAATGGCAATCCACAATCGTGCAGGCCAACCTGCACAACAGAGTGAT > minE/436763‑436903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |