| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1152045 | 110 (1.350) | 5 (0.070) | 3/88 | NT | 5.2% | coding (741/930 nt) | fabD | malonyl‑CoA‑[acyl‑carrier‑protein] transacylase |
| ? | AP009048 | = 1152069 | 83 (1.140) | coding (765/930 nt) | fabD | malonyl‑CoA‑[acyl‑carrier‑protein] transacylase | |||||
GCACCAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1151971‑1152045‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactgAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCACAT < AP009048/1152069‑1152002 GCACCAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGC < 1:1854986/71‑1GCACCAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGC < 1:7190461/71‑1 CCAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACT < 1:1954305/71‑1 CAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTG > 1:4456510/1‑71 TTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGC < 1:3790423/61‑1 TCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTG > 1:6763808/1‑64 TCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTG > 1:3864510/1‑64 CCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTG < 1:2735395/63‑1 ATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCA > 1:2390695/1‑50 ATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCA > 1:3131013/1‑50 TGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCA > 1:4912546/1‑43 TGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGAACCGGGTTATACAACTGACGTACCAGTG < 1:1491009/70‑1 TGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGAACCGGGTTATACAACTGACGTACCAGTG < 1:2179914/70‑1 CGAAACCAATGGTGATGCCATCCGTGACGCACTGAACCGGGTTATACAACTGACGTACCAGT > 1:364212/1‑62 GAAACCAATGGTGATGCCATCCGTGACGCACTGAACCGGGTTATACAACTGACGTACCAGT < 1:4051032/61‑1 GAAACCAATGGTGATGCCATCCGTGACGCACTGAACCGGGTTATACAACTGACGTACCAGT < 1:4603446/61‑1 CACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTaa > 1:6402329/1‑68 CACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCAC < 1:4371279/71‑1 CACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCAC < 1:4863800/71‑1 CACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCAC < 1:5507329/71‑1 CACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCA < 1:7047385/70‑1 CACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCA < 1:2553809/70‑1 CACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTC > 1:4245564/1‑62 ACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTT < 1:7611332/59‑1 ACTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTT < 1:3632964/59‑1 CTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCAT > 1:7198465/1‑64 CTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCAT > 1:1513756/1‑64 CTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATG < 1:5170920/43‑1 CTGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATG < 1:6857926/43‑1 TGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCACAT > 1:3054756/1‑70 TGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTC < 1:576790/59‑1 TGAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTC < 1:2440408/59‑1 GCACCAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1151971‑1152045‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactgAACCGGGTTATACAACTGACGTACCAGTGCGTCACGGATGGCATCACCATTGGTTTCGCATTTCACAT < AP009048/1152069‑1152002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |