New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AP009048 = 1152045110 (1.350)5 (0.070) 3/88 NT 5.2% coding (741/930 nt) fabD malonyl‑CoA‑[acyl‑carrier‑protein] transacylase
?AP009048 = 1152069 83 (1.140)coding (765/930 nt) fabD malonyl‑CoA‑[acyl‑carrier‑protein] transacylase

Only 100 of 131 total aligned reads displayed.

TTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCGGGC  >  AP009048/1151999‑1152138
                                                                      |                                                                     
ttGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGtt                                                                       >  1:1024557/1‑71 (MQ=255)
 tGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGtt                                                                       >  1:6195213/1‑70 (MQ=255)
  gATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGtt                                                                       >  1:4299207/1‑69 (MQ=255)
  gATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGtt                                                                       >  1:4237404/1‑69 (MQ=255)
   aTGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTca                                                                     >  1:3054756‑M2/1‑68 (MQ=255)
     gtgAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcagtg                                                                  <  1:4371279‑M2/71‑6 (MQ=255)
     gtgAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcagtg                                                                  <  1:5507329‑M2/71‑6 (MQ=255)
     gtgAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcagtg                                                                  <  1:4863800‑M2/71‑6 (MQ=255)
        aaaTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGtt                                                                       <  1:5771827/63‑1 (MQ=255)
        aaaTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGAc                                                               <  1:7214114/71‑1 (MQ=255)
         aaTGGGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACg                                                              <  1:6237877/71‑1 (MQ=255)
         aaTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACg                                                              <  1:336119/71‑1 (MQ=255)
         aaTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACg                                                              <  1:3810181/71‑1 (MQ=255)
         aaTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACg                                                              <  1:6406450/71‑1 (MQ=255)
          aTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcag                                                                    >  1:7198465‑M2/1‑61 (MQ=255)
          aTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACg                                                              >  1:6972803/1‑70 (MQ=255)
          aTGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACg                                                              <  1:2539275/70‑1 (MQ=255)
            gCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAg                                                           >  1:535938/1‑71 (MQ=255)
            gCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAg                                                           >  1:1533476/1‑71 (MQ=255)
             cGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGt                                                          <  1:5592796/71‑1 (MQ=255)
             cGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGt                                                          <  1:6449102/71‑1 (MQ=255)
              gAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTca                                                                     <  1:2440408‑M2/59‑3 (MQ=255)
              gAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTc                                                         <  1:6277226/71‑1 (MQ=255)
               aaaCCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTCGACGAAGTCt                                                        <  1:501791/71‑1 (MQ=255)
                aaCCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcagt                                                                   <  1:7611332‑M2/59‑5 (MQ=255)
                aaCCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcagt                                                                   <  1:3632964‑M2/59‑5 (MQ=255)
                 aCCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGt                                                      >  1:2820721/1‑71 (MQ=255)
                  ccAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGtt                                                     <  1:6101356/71‑1 (MQ=255)
                     aTGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAg                                                  >  1:6767206/1‑71 (MQ=255)
                       ggTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTa                                                >  1:6589037/1‑71 (MQ=255)
                       ggTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTa                                                >  1:6448907/1‑71 (MQ=255)
                       ggTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTa                                                >  1:1881671/1‑71 (MQ=255)
                        gTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTAc                                               <  1:4637696/71‑1 (MQ=255)
                           aTGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACAt                                             <  1:7342381/70‑1 (MQ=255)
                           aTGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATg                                            >  1:1786278/1‑71 (MQ=255)
                            tGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATgg                                           <  1:5822073/71‑1 (MQ=255)
                              ccATCTGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCa                                         <  1:7802753/71‑1 (MQ=255)
                              ccATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCa                                         <  1:6929587/71‑1 (MQ=255)
                               cATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcag                                                                    <  1:5170920‑M2/43‑4 (MQ=255)
                               cATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTcag                                                                    <  1:6857926‑M2/43‑4 (MQ=255)
                                   cGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAgcgc                                     >  1:1529163/1‑70 (MQ=255)
                                   cGTGACGCACTGGTACGTCAGTTGTATAACCCGCTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCa                                    <  1:986047/71‑1 (MQ=255)
                                   cGTGACGCACTAGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCa                                    <  1:3391028/71‑1 (MQ=255)
                                    gTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAg                                                  <  1:5169763/56‑1 (MQ=255)
                                    gTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAg                                                  <  1:4225997/56‑1 (MQ=255)
                                    gTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCaa                                   <  1:6564660/71‑1 (MQ=255)
                                       aCGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGc                                >  1:5620537/1‑71 (MQ=255)
                                       aCGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGc                                >  1:2283820/1‑71 (MQ=255)
                                        cGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTg                                                    <  1:3696618/50‑1 (MQ=255)
                                         gCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGt                              <  1:1294295/71‑1 (MQ=255)
                                          cACTGGTACGTCAGTTGTATAACCCGGTTcagtgcgtcacggatggcatcaccattggtttcgcatttca                              <  1:1491009‑M2/70‑42 (MQ=255)
                                          cACTGGTACGTCAGTTGTATAACCCGGTTcagtgcgtcacggatggcatcaccattggtttcgcatttca                              <  1:2179914‑M2/70‑42 (MQ=255)
                                          cACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGt                              <  1:7403289/70‑1 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTcagtgcgtcacggatggcatcaccattggtttcg                                     >  1:364212‑M2/1‑28 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTcagtgcgtcacggatggcatcaccattggtttc                                      <  1:4603446‑M2/61‑34 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGt                                                          >  1:7018068/1‑41 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGtt                                                     >  1:398193/1‑46 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGtt                                                     >  1:2944059/1‑46 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCg                               >  1:4845091/1‑68 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAg                            <  1:5400673/71‑1 (MQ=255)
                                           aCTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAg                            <  1:1591237/71‑1 (MQ=255)
                                             tGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGaa                          >  1:635091/1‑71 (MQ=255)
                                             tGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGaa                          >  1:3982604/1‑71 (MQ=255)
                                              ggTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGt                                                 <  1:7696096/47‑1 (MQ=255)
                                               gTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAgg                                 >  1:4583848/1‑62 (MQ=255)
                                               gTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAAc                         <  1:2877559/70‑1 (MQ=255)
                                               gTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAAc                         <  1:4304023/70‑1 (MQ=255)
                                               gTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACa                        >  1:643198/1‑71 (MQ=255)
                                                   gTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACAtctc                    <  1:3990201/71‑1 (MQ=255)
                                                    tCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAgcgc                                     <  1:6607202/53‑1 (MQ=255)
                                                     cAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTa                  >  1:5789725/1‑71 (MQ=255)
                                                      aGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCATAGAACATCTCTAt                 >  1:5438332/1‑71 (MQ=255)
                                                       gTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATg                <  1:918164/71‑1 (MQ=255)
                                                       gTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATg                <  1:7203997/71‑1 (MQ=255)
                                                       gTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATg                <  1:1705020/71‑1 (MQ=255)
                                                        ttGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGa               <  1:3389654/71‑1 (MQ=255)
                                                        ttGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGa               <  1:71811/71‑1 (MQ=255)
                                                         tGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATg                >  1:3600113/1‑69 (MQ=255)
                                                          gTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATg                <  1:5030515/68‑1 (MQ=255)
                                                          gTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAg             >  1:1042849/1‑71 (MQ=255)
                                                          gTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAg             >  1:7909664/1‑71 (MQ=255)
                                                          gTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAg             >  1:2490886/1‑71 (MQ=255)
                                                           tataACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGt            <  1:6880068/71‑1 (MQ=255)
                                                           tataACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGt            <  1:3020281/71‑1 (MQ=255)
                                                             taACCCGGTTCAGTGGACGAGGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCg          >  1:7489072/1‑71 (MQ=255)
                                                              aaCCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTa                  <  1:2054292/62‑1 (MQ=255)
                                                              aaCCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCgg         >  1:5588598/1‑71 (MQ=255)
                                                                cccGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCa                                    <  1:355974/42‑1 (MQ=255)
                                                                cccGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCa                                    <  1:304136/42‑1 (MQ=255)
                                                                cccGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGGACATCTCTATGAAGTCGGcc       >  1:169493/1‑71 (MQ=255)
                                                                cccGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGcc       >  1:4458409/1‑71 (MQ=255)
                                                                 ccGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGccc      <  1:4981446/71‑1 (MQ=255)
                                                                  cGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACa                        >  1:7833777/1‑52 (MQ=255)
                                                                  cGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACa                        >  1:7860721/1‑52 (MQ=255)
                                                                  cGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCg     >  1:3777150/1‑71 (MQ=255)
                                                                  cGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCg     >  1:7465944/1‑71 (MQ=255)
                                                                  cGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCg     <  1:5082602/71‑1 (MQ=255)
                                                                    gTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCggg   >  1:5203791/1‑71 (MQ=255)
                                                                    gTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCggg   >  1:6102720/1‑71 (MQ=255)
                                                                     ttCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCGGGc  <  1:4176118/71‑1 (MQ=255)
                                                                      |                                                                     
TTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCGGGC  >  AP009048/1151999‑1152138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.