| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2943244 | 103 (1.260) | 10 (0.140) | 3/86 | NT | 9.5% | coding (47/444 nt) | ygdK | predicted Fe‑S metabolism protein |
| ? | AP009048 | = 2943253 | 101 (1.410) | coding (56/444 nt) | ygdK | predicted Fe‑S metabolism protein | |||||
GACCGCGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2943169‑2943244‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtaacGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTCATTAATCCACCAATAA < AP009048/2943253‑2943184 GACCGCGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACC > 1:3766446/1‑71 ACCGCGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACC < 1:5606933/70‑1 CCGCGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCCCCGGACATCCGTTCGGCACAACCGT < 1:1827536/71‑1 GCGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAA < 1:4364208/71‑1 CGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAAC > 1:5194204/1‑71 ACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGTTACGGTT > 1:2299196/1‑62 ACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGTTACGGTT > 1:7107253/1‑62 ACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGTTACGGTT > 1:5335347/1‑62 TTCGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGT < 1:7741042/43‑1 TTCGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGT < 1:3649886/43‑1 TTCGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGT < 1:533464/43‑1 TTCGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGT < 1:141335/43‑1 CGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGTTA > 1:4692682/1‑43 CGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGTTA > 1:882636/1‑43 CGCCGGACATCCGTTCGGCACAACCGTAACGTTTCTGCGGTTA > 1:1723194/1‑43 CGTAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCG < 1:4219729/52‑1 CGTAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCG < 1:4055780/52‑1 CGTAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCG < 1:6026112/52‑1 GTAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTCATTAATCCACC > 1:6459366/1‑70 TAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTC < 1:4880966/58‑1 TAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTC < 1:386203/58‑1 TAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTC < 1:2890217/58‑1 TAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGT < 1:661843/57‑1 TAACGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGT < 1:6923543/57‑1 ACGTTTCTGCGGTTACGGTTGTGCCTAACGGATGTCCGGCGAATTGCGGGTTTGTCATTAATCCACCAAT < 1:7500494/70‑1 CGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTCATTAATCCACCAATAA < 1:4271644/71‑1 CGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTCATTAATCCACCAATAA > 1:1809660/1‑71 GACCGCGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2943169‑2943244‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtaacGTTTCTGCGGTTACGGTTGTGCCGAACGGATGTCCGGCGAATTGCGGGTTTGTCATTAATCCACCAATAA < AP009048/2943253‑2943184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |