| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2943244 | 103 (1.260) | 10 (0.140) | 3/86 | NT | 9.5% | coding (47/444 nt) | ygdK | predicted Fe‑S metabolism protein |
| ? | AP009048 | = 2943253 | 101 (1.410) | coding (56/444 nt) | ygdK | predicted Fe‑S metabolism protein | |||||
Only 100 of 163 total aligned reads displayed.
CGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATG > AP009048/2943174‑2943314 | cgcgcTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAAC > 1:5194204‑M1/1‑71 (MQ=255) cgcTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCg < 1:2244916/71‑1 (MQ=255) cgcTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCg < 1:3482390/71‑1 (MQ=255) gcTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGc < 1:6939483/71‑1 (MQ=255) aaTTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGaaa > 1:2056563/1‑71 (MQ=255) aaTTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGaaa > 1:2417426/1‑71 (MQ=255) aaTTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGaaa > 1:6524881/1‑71 (MQ=255) aaTTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGaaa > 1:7423706/1‑71 (MQ=255) ttattGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACg < 1:4271644‑M2/71‑2 (MQ=255) attGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTAGGCACAACCGTAACCGCAGAAACgt < 1:7500494‑M2/70‑3 (MQ=255) ttGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGa < 1:7180319/64‑1 (MQ=255) aTGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCa > 1:776706/1‑51 (MQ=255) tGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGa < 1:4921088/52‑1 (MQ=255) tGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGa < 1:6555607/52‑1 (MQ=255) gACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGaaa > 1:7603083/1‑53 (MQ=255) gACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgtta < 1:386203‑M2/58‑5 (MQ=255) gACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgtta < 1:2890217‑M2/58‑5 (MQ=255) aCAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACgtttctgcggttacggtt > 1:2299196‑M1/1‑44 (MQ=255) aCAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACgtttctgcggttacggtt > 1:5335347‑M1/1‑44 (MQ=255) aCAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCg > 1:1832667/1‑70 (MQ=255) aCCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCg > 1:794484/1‑71 (MQ=255) cccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCa > 1:5913863/1‑56 (MQ=255) cccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCa > 1:5582600/1‑56 (MQ=255) cccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCa > 1:2104623/1‑56 (MQ=255) ccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGt < 1:3284782/70‑1 (MQ=255) cGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgttacg < 1:4055780‑M2/52‑7 (MQ=255) cGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgttacg < 1:4219729‑M2/52‑7 (MQ=255) cGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgttacg < 1:6026112‑M2/52‑7 (MQ=255) aaTTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATa > 1:6321061/1‑54 (MQ=255) aaTTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATa > 1:6934962/1‑54 (MQ=255) aaTTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATAc > 1:2532706/1‑55 (MQ=255) ttCGCCGGACATCCGTTCGGCACAACCGTAACgtttctgcggt < 1:7741042‑M1/43‑12 (MQ=255) ttCGCCGGACATCCGTTCGGCACAACCGTAACgtttctgcggt < 1:533464‑M1/43‑12 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACgtttctgcggtta > 1:4692682‑M1/1‑30 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:7332828/1‑70 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa < 1:393105/70‑1 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa < 1:2208224/70‑1 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:3393531/1‑70 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:1803183/1‑70 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAAt > 1:6318274/1‑71 (MQ=255) ccGGACATCCGTTCGGCACAACCGTAACCGCAGAAAc < 1:7900197/37‑1 (MQ=255) ccGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATgg < 1:1307761/71‑1 (MQ=255) ggACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATggg > 1:6962949/1‑70 (MQ=255) tCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCa < 1:6161830/60‑1 (MQ=255) tCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCa < 1:1778970/60‑1 (MQ=255) tCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCa < 1:2382494/60‑1 (MQ=255) tCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCa < 1:773645/60‑1 (MQ=255) ccGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATa > 1:2546995/1‑70 (MQ=255) gTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCg > 1:5986572/1‑44 (MQ=255) gTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATaa > 1:3539826/1‑69 (MQ=255) gTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAat < 1:513429/71‑1 (MQ=255) gTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAat < 1:7336365/71‑1 (MQ=255) ttCGGCACAACCGTAACCTCAGAAACGTTACGCAATACCTTCGCACCGTTGACGc < 1:7720504/55‑1 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAAt > 1:1632484/1‑36 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAAt > 1:470371/1‑36 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAAt > 1:2337949/1‑36 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAAt > 1:185491/1‑36 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGc < 1:3732205/55‑1 (MQ=255) tCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAatat > 1:6136559/1‑71 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATAcc > 1:4197200/1‑37 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGa > 1:5057971/1‑50 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAatat < 1:6033222/70‑1 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATc > 1:1524238/1‑71 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATc > 1:6175015/1‑71 (MQ=255) cacaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCAcc < 1:4220746/42‑1 (MQ=255) cacaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa < 1:7547000/52‑1 (MQ=255) cacaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATgg < 1:1132622/55‑1 (MQ=255) cacaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGcc < 1:1038873/71‑1 (MQ=255) cacaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGcc < 1:1573926/71‑1 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCta > 1:567741/1‑34 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:5194103/1‑51 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:6825673/1‑51 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:1851306/1‑51 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:4811053/1‑51 (MQ=255) aaCCGTAACCGCAGAAACgttacggttgtgccgaacggatgtccggcgaattgcgggtttgt > 1:7107253‑M2/1‑18 (MQ=255) aaCCGTAACCGCAGAAACgttacggttgtgccgaacggatgtccggcgaattgcgggtttgt > 1:5335347‑M2/1‑18 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAg < 1:3361787/54‑1 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAg < 1:5778846/54‑1 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGtt > 1:1486162/1‑70 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGtt > 1:7271225/1‑70 (MQ=255) cGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGa > 1:4174269/1‑71 (MQ=255) cGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGa > 1:1723476/1‑71 (MQ=255) gTAACgtttctgcggttacggttgtgccgaacggatgtccggcgaattgcgggtttgtcattaatccacc > 1:6459366‑M1/1‑5 (MQ=255) tAACgtttctgcggttacggttgtgccgaacggatgtccggcgaattgcgggtttgtc < 1:2890217‑M1/58‑55 (MQ=255) tAACgtttctgcggttacggttgtgccgaacggatgtccggcgaattgcgggtttgtc < 1:4880966‑M1/58‑55 (MQ=255) tAACgtttctgcggttacggttgtgccgaacggatgtccggcgaattgcgggtttgt < 1:661843‑M1/57‑54 (MQ=255) tAACgtttctgcggttacggttgtgccgaacggatgtccggcgaattgcgggtttgt < 1:6923543‑M1/57‑54 (MQ=255) tAACCGCAGAAACgttacggttgtgccgaacggatgtccggcg > 1:882636‑M2/1‑13 (MQ=255) tAACCGCAGAAACgttacggttgtgccgaacggatgtccggcg > 1:1723194‑M2/1‑13 (MQ=255) tAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGa > 1:1694184/1‑39 (MQ=255) tAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCa < 1:3951708/64‑1 (MQ=255) tAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGAt > 1:5441938/1‑70 (MQ=255) aaCCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCa > 1:4333460/1‑71 (MQ=255) aaCCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCa > 1:3595449/1‑71 (MQ=255) aCgtttctgcggttacggttgtgcctaacggatgtccggcgaattgcgggtttgtcattaatccaccaat < 1:7500494‑M1/70‑69 (MQ=255) aCCGCAGAAACgttacggttgtgccgaacggatgtccggcgaa < 1:3649886‑M2/43‑33 (MQ=255) aCCGCAGAAACgttacggttgtgccgaacggatgtccggcgaa < 1:141335‑M2/43‑33 (MQ=255) aCCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCAt > 1:2264457/1‑71 (MQ=255) aCCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCAt > 1:1113776/1‑71 (MQ=255) cgtttctgcggttacggttgtgccgaacggatgtccggcgaattgcgggtttgtcattaatccaccaataa > 1:1809660‑M1/1‑1 (MQ=255) | CGCGCTGGAATTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATG > AP009048/2943174‑2943314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |