| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2943244 | 103 (1.260) | 10 (0.140) | 3/86 | NT | 9.5% | coding (47/444 nt) | ygdK | predicted Fe‑S metabolism protein |
| ? | AP009048 | = 2943253 | 101 (1.410) | coding (56/444 nt) | ygdK | predicted Fe‑S metabolism protein | |||||
Only 100 of 151 total aligned reads displayed.
TTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTGGGGAAA > AP009048/2943184‑2943323 | ggtggATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgttac > 1:6459366‑M2/1‑65 (MQ=255) aaTGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATAcc < 1:389213/70‑1 (MQ=255) aTGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCt < 1:1451630/70‑1 (MQ=255) gACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgtta < 1:4880966‑M2/58‑5 (MQ=255) gACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgtta < 1:2890217‑M2/58‑5 (MQ=255) gACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCg > 1:2154855/1‑71 (MQ=255) aCAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgtta < 1:661843‑M2/57‑5 (MQ=255) aCAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgtta < 1:6923543‑M2/57‑5 (MQ=255) aCAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCg > 1:1832667/1‑70 (MQ=255) aCCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCg < 1:330135/71‑1 (MQ=255) cccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCa > 1:5913863/1‑56 (MQ=255) cccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCa > 1:2104623/1‑56 (MQ=255) cccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCa > 1:5582600/1‑56 (MQ=255) ccGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGt < 1:3284782/70‑1 (MQ=255) cGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgttacg < 1:6026112‑M2/52‑7 (MQ=255) cGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACgttacg < 1:4219729‑M2/52‑7 (MQ=255) cAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGa > 1:7364679/1‑70 (MQ=255) aaTTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATa > 1:6321061/1‑54 (MQ=255) aaTTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATAc > 1:2532706/1‑55 (MQ=255) tCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGa > 1:4324867/1‑66 (MQ=255) tCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGc < 1:751875/69‑1 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa < 1:393105/70‑1 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:3393531/1‑70 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:7332828/1‑70 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:1803183/1‑70 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAAt > 1:6318274/1‑71 (MQ=255) cGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAAt > 1:3517589/1‑71 (MQ=255) gCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATg > 1:2289547/1‑71 (MQ=255) ccGGACATCCGTTCGGCACAACCGTAACCGCAGAAAc < 1:7900197/37‑1 (MQ=255) ccGGACATCCGTTCGGCACAACCGTAACCGCAGAAAc < 1:1121458/37‑1 (MQ=255) ccGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATgg < 1:1307761/71‑1 (MQ=255) cGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATgg > 1:7723798/1‑70 (MQ=255) ggACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATggg > 1:6962949/1‑70 (MQ=255) ggACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATggg > 1:4111336/1‑70 (MQ=255) ggACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATggg > 1:1847539/1‑70 (MQ=255) aCATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATggg > 1:5234037/1‑68 (MQ=255) tCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCa < 1:773645/60‑1 (MQ=255) tCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCa < 1:1778970/60‑1 (MQ=255) ccGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATa > 1:2546995/1‑70 (MQ=255) gTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATaa > 1:3539826/1‑69 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAAt > 1:185491/1‑36 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAAt > 1:1632484/1‑36 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAAt > 1:2337949/1‑36 (MQ=255) ttCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGc < 1:3732205/55‑1 (MQ=255) tCGGCACAACCGTAACCGCAGAAACTTTACGCAATACCTTCGCACCGtt < 1:5351546/49‑1 (MQ=255) tCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATaaa > 1:7463195/1‑68 (MQ=255) tCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAatat > 1:6136559/1‑71 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATAcc > 1:6145579/1‑37 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGa > 1:514852/1‑50 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGa > 1:5057971/1‑50 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAatat < 1:6033222/70‑1 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATc > 1:5953288/1‑71 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATc > 1:6175015/1‑71 (MQ=255) cGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATc > 1:1533614/1‑71 (MQ=255) cacaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCAcc < 1:4220746/42‑1 (MQ=255) cacaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGcc < 1:1573926/71‑1 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGc < 1:7665702/49‑1 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:6825673/1‑51 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:57537/1‑51 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:1851306/1‑51 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:5194103/1‑51 (MQ=255) acaACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCaa > 1:4811053/1‑51 (MQ=255) aaCCGTAACCGCAGAAACgttacggttgtgccgaacggatgtccggcgaattgcgggtttgt > 1:7107253‑M2/1‑18 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAg < 1:2396162/54‑1 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAg < 1:5778846/54‑1 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGtt > 1:7271225/1‑70 (MQ=255) ccGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGtt > 1:1486162/1‑70 (MQ=255) cGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGa > 1:4174269/1‑71 (MQ=255) cGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGa > 1:1723476/1‑71 (MQ=255) cGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGa > 1:7795426/1‑71 (MQ=255) tAACCGCAGAAACgttacggttgtgccgaacggatgtccggcg > 1:882636‑M2/1‑13 (MQ=255) tAACCGCAGAAACgttacggttgtgccgaacggatgtccggcg > 1:4692682‑M2/1‑13 (MQ=255) tAACCGCAGAAACgttacggttgtgccgaacggatgtccggcg > 1:1723194‑M2/1‑13 (MQ=255) tAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCa < 1:6937146/64‑1 (MQ=255) tAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCa < 1:3951708/64‑1 (MQ=255) tAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGAt > 1:5441938/1‑70 (MQ=255) aaCCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCa > 1:4333460/1‑71 (MQ=255) aCCGCAGAAACgttacggttgtgccgaacggatgtccggcgaa < 1:533464‑M2/43‑33 (MQ=255) aCCGCAGAAACgttacggttgtgccgaacggatgtccggcgaa < 1:3649886‑M2/43‑33 (MQ=255) aCCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCAt > 1:1113776/1‑71 (MQ=255) aCCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCAt > 1:2264457/1‑71 (MQ=255) cGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGa < 1:2503013/45‑1 (MQ=255) cGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGa < 1:7321014/45‑1 (MQ=255) cGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGa < 1:7286401/45‑1 (MQ=255) cGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGa < 1:3954988/45‑1 (MQ=255) cGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGa < 1:1328112/45‑1 (MQ=255) gCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGa < 1:6996920/44‑1 (MQ=255) cAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGTGAAGATAAATATCGCCAGTTGATCATGCTg < 1:6176463/71‑1 (MQ=255) cAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTg > 1:339379/1‑71 (MQ=255) aGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTgg < 1:1032833/71‑1 (MQ=255) aGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTgg < 1:2810032/71‑1 (MQ=255) aGAAACGTTACGCAATACCTTAGCACCGTTGACGCaa < 1:5101648/37‑1 (MQ=255) aaaCGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGc < 1:1017523/66‑1 (MQ=255) aCGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATc > 1:2311962/1‑49 (MQ=255) aCGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATc > 1:5566706/1‑49 (MQ=255) aCGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTGGGGa > 1:7504110/1‑70 (MQ=255) cGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATaaa < 1:6657844/44‑1 (MQ=255) cGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATaaa < 1:1639056/44‑1 (MQ=255) cGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGa < 1:7605857/57‑1 (MQ=255) cGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTGGGGaaa < 1:650663/71‑1 (MQ=255) | TTATTGGTGGATTAATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTGGGGAAA > AP009048/2943184‑2943323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |