| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4055520 = | 70 (0.860) | 8 (0.110) | 5/84 | NT | 12.4% | coding (137/285 nt) | yrhB | hypothetical protein |
| ? | AP009048 | 4055548 = | 53 (0.760) | coding (109/285 nt) | yrhB | hypothetical protein | |||||
Only 100 of 104 total aligned reads displayed.
ATGAATTTCACCACTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAATGAC > AP009048/4055450‑4055590 | atgaatTTCACCACTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAg < 1:26330/71‑1 (MQ=255) tgaatTTCACCACTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGt < 1:3371742/71‑1 (MQ=255) ccttgatgatgcagatctcccggtcgtcattactctacatggacgctttagccagggctggtatttctGt > 1:5631089‑M1/69‑70 (MQ=255) ccttgatgatgcagatctcccggtcgtcattactctacatggacgctttagccagggctggtatttctGt > 1:1330267‑M1/69‑70 (MQ=255) ccttgatgatgcagatctcccggtcgtcattactctacatggacgctttagccagggctggtatttctGt > 1:387958‑M1/69‑70 (MQ=255) cttgaagatgcagatctcccggtcgtcattactctacatggacgctttagccagggctggtatttctGttt > 1:6512254‑M1/68‑71 (MQ=255) aatTTCACCACTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGttt > 1:819001/1‑71 (MQ=255) aatTTCACCACTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGttt > 1:2365064/1‑71 (MQ=255) atTTCACCACTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGttt < 1:136222/70‑1 (MQ=255) gatgatgcagatctcccggtcgtcattactctacatggacgctttagccagggctggtatttctGTTTCg > 1:1080531‑M1/65‑70 (MQ=255) atgatgcagatctcccggtcgtcattactctacatggacgctttagccagggctggtatttctGTTTCga > 1:3910938‑M1/64‑70 (MQ=255) ccacTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGaaa < 1:4554233/71‑1 (MQ=255) ccacTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGaaa < 1:5895401/71‑1 (MQ=255) acTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAAtt < 1:3679429/71‑1 (MQ=255) acTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAAtt > 1:6456948/1‑71 (MQ=255) cTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATtc < 1:3055451/71‑1 (MQ=255) cTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATtc > 1:7680525/1‑71 (MQ=255) cTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATtc > 1:7473336/1‑71 (MQ=255) atctcccggtcgtcattactctacatggacgctttagccagggctggtatttctg > 1:4948521‑M1/55‑55 (MQ=255) tATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGt < 1:578411/68‑1 (MQ=255) tATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGc < 1:5712426/70‑1 (MQ=255) aTCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCt < 1:1053758/70‑1 (MQ=255) aTCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCt < 1:7642513/70‑1 (MQ=255) aataatAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCg > 1:2119173/1‑70 (MQ=255) aataatAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGa < 1:1878733/71‑1 (MQ=255) aataaAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGaaa > 1:5320731/1‑70 (MQ=255) ataaAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGa < 1:1642138/67‑1 (MQ=255) taaAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGaaa > 1:1349375/1‑68 (MQ=255) aaaaGGTGCGTTACCAGCTAAGCGCTCGGCCTCATCTCCAGTTTCgag < 1:7225173/48‑1 (MQ=255) aaaGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCgag > 1:4838082/1‑47 (MQ=255) aaaGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCgag > 1:2729160/1‑47 (MQ=255) aaaGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGt > 1:7096194/1‑57 (MQ=255) aaaGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGt > 1:7105537/1‑57 (MQ=255) aaaGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGa > 1:3238596/1‑70 (MQ=255) aaGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATtct > 1:4831367/1‑53 (MQ=255) ggTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGa > 1:3085045/1‑61 (MQ=255) ggTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATa > 1:535480/1‑71 (MQ=255) tctacattgacgctttagccagggcaggtatttctGTTTCGAGAAATtc < 1:3991452‑M1/14‑1 (MQ=255) tctacatggacgctttagccagggctggtatttctGTTTCGAGAAATTCTCGTGCTTCGaaa < 1:811146‑M1/27‑1 (MQ=255) gCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAAc < 1:1607101/61‑1 (MQ=255) gCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATAc < 1:2670728/69‑1 (MQ=255) gCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATAc < 1:2661550/69‑1 (MQ=255) gCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTAGTGCTTCGAAACAGAAATaa < 1:5521388/69‑2 (MQ=255) gTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCgaga < 1:3487773/40‑1 (MQ=255) gTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCgaga < 1:1442976/40‑1 (MQ=255) ttACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCtt < 1:4778144/52‑1 (MQ=255) ttACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGcc < 1:6968251/71‑1 (MQ=255) tACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCg > 1:3234745/1‑46 (MQ=255) tACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCg > 1:2969525/1‑46 (MQ=255) tACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAAt > 1:2529277/1‑63 (MQ=255) aCCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGaaa > 1:6473082/1‑39 (MQ=255) aCCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGaaa > 1:1763050/1‑55 (MQ=255) aCCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGc > 1:1791634/1‑68 (MQ=255) aCCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGc > 1:5011173/1‑68 (MQ=255) aCCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCt > 1:318155/1‑71 (MQ=255) aCCAGCTAAGCGCGCGGCCTCATCTCAAGTTTCGAGaaa > 1:2415868/1‑39 (MQ=255) aCCAGCTAAGCGCGCGGACTCATCTCCAGTTTCGAGaaa > 1:4465384/1‑39 (MQ=255) cAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTgg > 1:2115205/1‑71 (MQ=255) acgctttagccagggctggtatttctGTTTCGAGAAATTCTCGTGCTTCGaaa > 1:7040806‑M1/27‑53 (MQ=255) acgctttagccaggcctggtatttctGTTTCGAGAAATTCTCGTGCTTCGaaa > 1:2097873‑M1/27‑53 (MQ=255) cgctttagccagggctggtatttcaGTTTCGAGAAATTCTCGTg > 1:5883777‑M1/26‑44 (MQ=255) gctttagccagggctggtatttcaGTTTCGAGAAATTCTCGTg > 1:5407109‑M1/25‑43 (MQ=255) ctttagccagggctggtatttctGTTTCGAGAAATTCTCGTGCtt < 1:4457101‑M1/22‑1 (MQ=255) cTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGc < 1:6931811/43‑1 (MQ=255) cTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAg < 1:1379698/53‑1 (MQ=255) cTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAg < 1:4901767/53‑1 (MQ=255) cTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTa < 1:434330/71‑1 (MQ=255) cTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTa < 1:2530811/71‑1 (MQ=255) cTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTa < 1:684848/71‑1 (MQ=255) aaGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACa < 1:4720875/50‑1 (MQ=255) tagccagggctggtatttctGTTTCGAGAAATTCTCGTGCTTCGaaa < 1:3164804‑M1/27‑1 (MQ=255) ggCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCg > 1:1565744/1‑37 (MQ=255) gCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATg < 1:1712314/71‑1 (MQ=255) ccTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGt < 1:3400382/71‑1 (MQ=255) cTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTa < 1:2864598/71‑1 (MQ=255) tCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATg > 1:592065/1‑68 (MQ=255) cATCTCCAGTTTCGAGAAATTCTCGTGCTTCGaaa < 1:1842329/35‑1 (MQ=255) cATCTCCAGTTTCGAGAAATTCTCGTGCTTCGaaa < 1:1996116/35‑1 (MQ=255) cATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCa > 1:2436869/1‑46 (MQ=255) cATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCa > 1:7172944/1‑46 (MQ=255) cATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCa > 1:7448234/1‑46 (MQ=255) cATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCa > 1:1631701/1‑46 (MQ=255) cATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCa > 1:3114003/1‑46 (MQ=255) aTCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAAt > 1:7839287/1‑41 (MQ=255) aTCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGc < 1:3170377/53‑1 (MQ=255) aTCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTagag > 1:650102/1‑71 (MQ=255) aTCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTa > 1:2900966/1‑68 (MQ=255) tcCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTaa > 1:7267169/1‑53 (MQ=255) tcCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTaa > 1:2488558/1‑53 (MQ=255) tcCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACAAGCCCTGGCTaa > 1:119688/1‑53 (MQ=255) ccAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTaa > 1:7049149/1‑70 (MQ=255) ccAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAAt > 1:2940450/1‑71 (MQ=255) cAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCa > 1:3935317/1‑59 (MQ=255) cAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAAt < 1:2001392/70‑1 (MQ=255) cAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAAt < 1:740427/70‑1 (MQ=255) cAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAAt < 1:7741972/70‑1 (MQ=255) cAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAAt < 1:6919446/70‑1 (MQ=255) GTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAg > 1:3070641‑M1/1‑39 (MQ=255) GTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGc > 1:6352035‑M1/1‑52 (MQ=255) GTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAATgac < 1:3099484‑M1/71‑1 (MQ=255) | ATGAATTTCACCACTGTCTTTATCAATAATAAAAGGTGCGTTACCAGCTAAGCGCGCGGCCTCATCTCCAGTTTCGAGAAATTCTCGTGCTTCGAAACAGAAATACCAGCCCTGGCTAAAGCGTCCATGTAGAGTAATGAC > AP009048/4055450‑4055590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |