| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1908905 = | 93 (1.140) | 10 (0.140) | 5/88 | NT | 10.7% | intergenic (‑131/+35) | rrmA/cspC | 23S rRNA m1G745 methyltransferase/stress protein, member of the CspA‑family |
| ? | AP009048 | 1908925 = | 83 (1.140) | intergenic (‑151/+15) | rrmA/cspC | 23S rRNA m1G745 methyltransferase/stress protein, member of the CspA‑family | |||||
Only 100 of 151 total aligned reads displayed.
GATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGA > AP009048/1908855‑1908995 | gATAAAGCATATTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAg < 1:1497040/71‑1 (MQ=255)gATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAg < 1:3821832/71‑1 (MQ=255) aaaGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGAt > 1:5276805/1‑70 (MQ=255) aaaGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGAt > 1:416136/1‑70 (MQ=255) aaGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCa < 1:1024721/71‑1 (MQ=255) aGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAg > 1:6616895/1‑71 (MQ=255) gCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGt > 1:1622735/1‑71 (MQ=255) cATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTg < 1:7901224/71‑1 (MQ=255) gTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGAtt > 1:4585524/1‑71 (MQ=255) aaaaGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCg < 1:960301/70‑1 (MQ=255) aaaaGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGa > 1:7727635/1‑71 (MQ=255) aGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCa < 1:1055344/71‑1 (MQ=255) aGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCa < 1:5331139/71‑1 (MQ=255) tCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAg > 1:2288107/1‑55 (MQ=255) cGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAg > 1:4788900/1‑71 (MQ=255) cGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAg > 1:416501/1‑71 (MQ=255) aTTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTg < 1:5889330/71‑1 (MQ=255) ttCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGt > 1:5038801/1‑71 (MQ=255) tCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGAt < 1:7864194/46‑1 (MQ=255) tCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGAt < 1:3751687/46‑1 (MQ=255) tCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATc < 1:1196883/60‑1 (MQ=255) tCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATc < 1:3158341/60‑1 (MQ=255) tCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATc < 1:2155452/60‑1 (MQ=255) tCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATc < 1:3948025/60‑1 (MQ=255) cgacgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGAt < 1:4723987/45‑1 (MQ=255) cgacgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGtt < 1:2961057/70‑1 (MQ=255) cgacgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTa > 1:2962220/1‑71 (MQ=255) cgacgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTa > 1:5737172/1‑71 (MQ=255) acgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAg > 1:5079432/1‑46 (MQ=255) acgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAg > 1:7298515/1‑46 (MQ=255) acgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACg > 1:519319/1‑71 (MQ=255) cgaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAg > 1:1108299/1‑45 (MQ=255) gaGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGt > 1:6462736/1‑70 (MQ=255) aGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATc < 1:6811717/41‑1 (MQ=255) aGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATc < 1:7242580/41‑1 (MQ=255) aGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATc < 1:4448120/41‑1 (MQ=255) tttATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCa < 1:1947370/51‑1 (MQ=255) tttATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCa < 1:4948683/51‑1 (MQ=255) tataGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGAt > 1:6098079/1‑47 (MQ=255) taGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGt > 1:5823724/1‑56 (MQ=255) taGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGt > 1:7077359/1‑56 (MQ=255) gCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCg < 1:7421573/41‑1 (MQ=255) gCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGAt < 1:4462964/48‑1 (MQ=255) gCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAAc < 1:6955314/63‑1 (MQ=255) gCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTg < 1:5440465/68‑1 (MQ=255) agaTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGa > 1:1146594/1‑70 (MQ=255) agaTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGa > 1:1231322/1‑70 (MQ=255) gaTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGc > 1:2596412/1‑62 (MQ=255) gaTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGc > 1:2921886/1‑62 (MQ=255) aTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCt > 1:637287/1‑71 (MQ=255) aTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCt > 1:6406042/1‑71 (MQ=255) aTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCt > 1:1225135/1‑71 (MQ=255) aTTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCt > 1:5224218/1‑71 (MQ=255) ttGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCtt < 1:6550244/71‑1 (MQ=255) tgaagtgtgaatacgcttcaGATCAGTGGATTCGATCAGATAGCTGTTAc < 1:6679513‑M2/30‑1 (MQ=255) tgaagtgtgaatacgcttcaGATCAGTGGATTCGATCAGATAGCTGTTAc < 1:667632‑M2/30‑1 (MQ=255) tgaagtgtgaatacgcttcaGATCAGTGGATTCGATCAGATAGCTGTTACg < 1:2414810‑M2/31‑1 (MQ=255) TGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTaa < 1:7445767‑M1/55‑1 (MQ=255) GAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCt < 1:1170106‑M1/59‑1 (MQ=255) GAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCt < 1:2334508‑M1/59‑1 (MQ=255) GAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCttt > 1:1985709‑M1/1‑70 (MQ=255) GAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCttt > 1:7613873‑M1/1‑70 (MQ=255) aagtgtgaatacgcttcaGATCAGTGGATTCGATCAGATAGCTGTTACGtt > 1:880624‑M2/19‑51 (MQ=255) aagtgtgaatacgcttcaGATCAGTGGATTCGATCAGATAGCTGTTACGt > 1:339475‑M2/19‑50 (MQ=255) AAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCt < 1:1951659‑M1/71‑1 (MQ=255) AAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCt > 1:2552350‑M1/1‑71 (MQ=255) AGCGTATTCACACTTCAGATCAGTGGATTCGATCa > 1:3866929‑M1/1‑35 (MQ=255) gtgtgaatacgcttcaGATCAGTGGATTCGATCAGa > 1:2854280‑M2/17‑36 (MQ=255) GCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCtt > 1:2929237‑M1/1‑66 (MQ=255) GCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTgg < 1:1966558‑M1/71‑1 (MQ=255) gtgaatacgcttcaGATCAGTGGATTGGATCAGATAGCTGTTACg < 1:2049447‑M2/31‑1 (MQ=255) gtgaatacgcttcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGcc > 1:6954996‑M2/15‑71 (MQ=255) gTATTCACACTTCAGATCAGTGGATTCGATCAGATa < 1:5289151/36‑1 (MQ=255) gTATTCACACTTCAGATCAGTGGATTCGATCAGATa < 1:142787/36‑1 (MQ=255) gTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGcc < 1:3313166/71‑1 (MQ=255) tATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCg < 1:1727713/71‑1 (MQ=255) aTTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCttt > 1:2741753/1‑63 (MQ=255) aTTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCttt > 1:5330168/1‑63 (MQ=255) ttCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCt < 1:7242443/60‑1 (MQ=255) ttCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCt < 1:7792660/60‑1 (MQ=255) ttCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTc < 1:1715236/71‑1 (MQ=255) tCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTAc < 1:6072569/40‑1 (MQ=255) tCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTAc < 1:3115670/40‑1 (MQ=255) tCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTAc < 1:2380033/40‑1 (MQ=255) acacTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCg < 1:5735871/52‑1 (MQ=255) acacTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCt > 1:1456324/1‑70 (MQ=255) acacTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCt > 1:7609106/1‑70 (MQ=255) acacTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCt > 1:7767965/1‑70 (MQ=255) acTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGc > 1:685471/1‑48 (MQ=255) cttcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAAt < 1:4622284‑M2/66‑1 (MQ=255) cttcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAAt < 1:7360125‑M2/66‑1 (MQ=255) ttcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCgg < 1:7096736‑M2/45‑1 (MQ=255) tcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTg < 1:5067101‑M2/41‑1 (MQ=255) tcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTg < 1:353556‑M2/41‑1 (MQ=255) tcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTg < 1:6358616‑M2/41‑1 (MQ=255) tcaGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTg < 1:4602188‑M2/41‑1 (MQ=255) caGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTg > 1:5548696‑M2/3‑43 (MQ=255) caGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTg > 1:3340556‑M2/3‑43 (MQ=255) caGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAAtt < 1:4079275‑M2/67‑1 (MQ=255) gATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGa < 1:4069845/71‑1 (MQ=255) | GATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGA > AP009048/1908855‑1908995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |