breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Exported	= 2518066	49 (0.800)	4 (0.080) +CTTGAGA	3/84	NT	8.6%	coding (1009/2109 nt)	spoT	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
	?	Exported	2715817 =	51 (0.830)					intergenic (‑14/‑257)	tsgA/ppiA	predicted transporter/peptidyl‑prolyl cis‑trans isomerase A
*	?	Exported	2068717 =	90 (1.470)	5 (0.090) +ACTG	3/90	NT	8.4%	coding (1073/1521 nt)	aer	fused signal transducer for aerotaxis sensory component and methyl accepting chemotaxis component
	?	Exported	2786335 =	29 (0.470)					coding (784/873 nt)	yjbC	23S rRNA pseudouridine synthase
*	?	Exported	1710515 =	48 (0.780)	6 (0.110) +GGGTAT	3/86	NT	10.7%	coding (533/1512 nt)	yphE	fused predicted sugar transporter subunits and ATP‑binding components of ABC superfamily
	?	Exported	= 2983235	66 (1.080)					coding (250/1425 nt)	creC	sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon
*	?	Exported	= 1370700	103 (1.680)	5 (0.090) +ACTG	3/90	NT	7.6%	coding (653/696 nt)	yohK	predicted inner membrane protein
	?	Exported	2786335 =	29 (0.470)					coding (784/873 nt)	yjbC	23S rRNA pseudouridine synthase
*	?	Exported	19620 =	64 (1.040)	7 (0.130) +GTGACT	3/86	NT	11.6%	coding (536/942 nt)	ribF	bifunctional riboflavin kinase and FAD synthetase
	?	Exported	= 2548513	58 (0.940)					coding (722/858 nt)	htrL	hypothetical protein