| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2827311 = | 90 (1.220) | 5 (0.080) | 3/88 | NT | 5.5% | coding (939/1116 nt) | dcuA | C4‑dicarboxylate antiporter |
| ? | Exported | 2827346 = | 92 (1.420) | coding (904/1116 nt) | dcuA | C4‑dicarboxylate antiporter | |||||
CAAAAGCACTGATGCCGATGGCTCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2827384‑2827311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGCAG > Exported/2827346‑2827414 CAAAAGCACTGATGCCGATGGCTCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCG < 1:2817591/71‑1 AAAGCACTGATGCCGATGGCTCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGT < 1:2463234/71‑1 AAAGCACTGATGCCGATGGCTCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGT < 1:2227672/71‑1 TCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGT < 1:1972572/51‑1 TCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGT < 1:2679934/51‑1 TCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGT < 1:3343988/51‑1 TCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGT < 1:3694497/51‑1 TCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGT < 1:3936663/51‑1 TGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTG > 1:3861419/1‑50 TGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTG > 1:2181420/1‑50 TGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGG > 1:4045318/1‑48 TGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGG > 1:929211/1‑48 TTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTGTAACGTTCAGTGCCAGAGCCATCGGCATCAGTGC > 1:1689867/1‑71 TTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTGTAACGTTCAGTGCCAGAGCCATCGGCATCAGTGC > 1:2943188/1‑71 TTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAG < 1:749804/68‑1 CACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTG > 1:104878/1‑68 TCTTTCGCTGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAG < 1:3003922/46‑1 GCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCA > 1:114693/1‑36 GCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCA > 1:2323723/1‑36 GCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCA > 1:1893517/1‑36 GCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCA > 1:1946620/1‑36 CGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAG > 1:3931638/1‑53 CGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAG > 1:4594663/1‑53 CGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAG > 1:1640519/1‑53 CGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAG > 1:2494684/1‑53 GTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGC < 1:1368403/70‑1 GTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAG > 1:3346947/1‑69 GTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAG > 1:327428/1‑69 GTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAG > 1:1572164/1‑69 GTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAG > 1:986201/1‑69 TGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGCAG < 1:2062615/71‑1 TGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGCAG < 1:845869/71‑1 GAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGCA < 1:1971861/69‑1 GAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCA > 1:752589/1‑64 GAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAG > 1:3304488/1‑57 GAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAG > 1:3265215/1‑57 CAAAAGCACTGATGCCGATGGCTCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2827384‑2827311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGCAG > Exported/2827346‑2827414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |