| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2827311 = | 90 (1.220) | 5 (0.080) | 3/88 | NT | 5.5% | coding (939/1116 nt) | dcuA | C4‑dicarboxylate antiporter |
| ? | Exported | 2827346 = | 92 (1.420) | coding (904/1116 nt) | dcuA | C4‑dicarboxylate antiporter | |||||
Only 100 of 137 total aligned reads displayed.
AGTACCCGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCT > Exported/2827242‑2827380 | ctgctctgctgtactctcaggctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttCa < 1:845869‑M1/2‑1 (MQ=255) tgctctgctgtactctcaggctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttc < 1:1971861‑M1/1‑1 (MQ=255) taCCCGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACAcc < 1:3808482/71‑1 (MQ=255) taCCCGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACAcc < 1:3284453/71‑1 (MQ=255) ctctgctgtactctcaggctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttCAc > 1:1572164‑M1/67‑69 (MQ=255) aCCCGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCg > 1:3078613/1‑71 (MQ=255) cccGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCg > 1:3217372/1‑70 (MQ=255) cccGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCg > 1:3015441/1‑70 (MQ=255) cccGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCg > 1:3247316/1‑70 (MQ=255) cccGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCg > 1:3573241/1‑70 (MQ=255) cccGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCg > 1:4589400/1‑70 (MQ=255) cccGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCg > 1:1758559/1‑70 (MQ=255) tgctgtactctcaggctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttc > 1:752589‑M1/64‑64 (MQ=255) atccatcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaag < 1:1610703/71‑1 (MQ=255) tccatcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGc < 1:1198447/62‑1 (MQ=255) tccatcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGc < 1:4658186/62‑1 (MQ=255) tccatcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaaga < 1:2541634/71‑1 (MQ=255) ctctcaggctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttc > 1:3304488‑M1/57‑57 (MQ=255) ctctcaggctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttc > 1:3265215‑M1/57‑57 (MQ=255) ccatcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaag > 1:2226336/1‑69 (MQ=255) ccatcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaag < 1:3630754/69‑1 (MQ=255) catcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaagaag > 1:4033836/1‑71 (MQ=255) catcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaagaag > 1:958963/1‑71 (MQ=255) catcTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaagaa < 1:766175/70‑1 (MQ=255) tACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcag < 1:4487716/71‑1 (MQ=255) ctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttCACCg > 1:1640519‑M1/49‑53 (MQ=255) ctgcaaccgcaaaagcactgatgccgatggctctggcactgaacgtttCACCg > 1:2494684‑M1/49‑53 (MQ=255) cagcaACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCa < 1:2775146/62‑1 (MQ=255) cagcaACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcg > 1:4643945/1‑68 (MQ=255) cagcaACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAAACACCGCAGCGAAAGAAGCa < 1:435304/62‑1 (MQ=255) gcaACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaag < 1:2988188/55‑1 (MQ=255) gcaACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaag < 1:3048689/55‑1 (MQ=255) gcaACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaag < 1:3897034/55‑1 (MQ=255) gcaACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAaag < 1:3204967/55‑1 (MQ=255) aCCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggtcagcgg > 1:3636841/1‑71 (MQ=255) aCCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggtcagcgg > 1:4049935/1‑71 (MQ=255) aCCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggtcagcgg > 1:3977822/1‑71 (MQ=255) aCCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggtcagcgg > 1:1684646/1‑71 (MQ=255) aCCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggtcagcgg > 1:2126407/1‑71 (MQ=255) aCCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggtcagcgg > 1:4754148/1‑71 (MQ=255) ccAGCGTTGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGaaa < 1:4429286/50‑1 (MQ=255) ccAGCGTCGGGTAGGTCGGCAGAATGAAcagaccagac < 1:2448671/38‑1 (MQ=255) ccAGCGTCGGGTAGGTCGGCAGAATGAAcagaccagac < 1:4004254/38‑1 (MQ=255) ccAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCaa < 1:4069815/57‑1 (MQ=255) ccAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCaa < 1:1143436/57‑1 (MQ=255) cAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGaaa < 1:3316010/49‑1 (MQ=255) cAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggtcagcggt < 1:4208564/70‑1 (MQ=255) aGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTg > 1:3610337/1‑70 (MQ=255) aGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTg > 1:1508092/1‑70 (MQ=255) gcactgatgccgatggctctggcactgaacgttaCACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaa > 1:2943188‑M1/35‑71 (MQ=255) gCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGa > 1:696152/1‑70 (MQ=255) cactgatgccgatggctctggcactgaacgtttCACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTg > 1:104878‑M1/34‑68 (MQ=255) ctgatgccgatggctctggcactgaacgtttCACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaa < 1:749804‑M1/37‑1 (MQ=255) tgatgccgatggctctggcactgaacgtttCACCGc > 1:2323723‑M1/31‑36 (MQ=255) tgatgccgatggctctggcactgaacgtttCACCGc > 1:1946620‑M1/31‑36 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGtt < 1:1440784/70‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:2931805/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:2479953/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:2252622/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:4699737/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:1015936/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:3828599/71‑1 (MQ=255) gTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGc < 1:963301/45‑1 (MQ=255) tAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAg < 1:1430495/71‑1 (MQ=255) tAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAg < 1:2591340/71‑1 (MQ=255) gTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAAcagcggt < 1:1862656/50‑1 (MQ=255) gTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGc < 1:4132990/71‑1 (MQ=255) ggCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGc > 1:2204071/1‑68 (MQ=255) ggCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:1999472/70‑1 (MQ=255) gCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCaga < 1:45377/71‑1 (MQ=255) gCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCaga < 1:4524420/71‑1 (MQ=255) cAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCagag < 1:2011981/71‑1 (MQ=255) cAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCagag < 1:1885903/71‑1 (MQ=255) aGAATGAACAGACCAGAAACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGc > 1:3968777/1‑71 (MQ=255) gAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGcc < 1:4614595/71‑1 (MQ=255) aTGAACAGACCAGACACCGCAGCGAAAGAAGCAAc > 1:823331/1‑35 (MQ=255) aTGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:2415539/1‑71 (MQ=255) aTGAACAGACCAGACACCGCAGCGAAACAAGCAAc > 1:1730320/1‑35 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaaa > 1:746904/1‑51 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaaa > 1:1722267/1‑51 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCa > 1:459036/1‑57 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:1153702/1‑70 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:847469/1‑70 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:3250940/1‑70 (MQ=255) aaCAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGtt > 1:3880218/1‑53 (MQ=255) aaCAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCagag < 1:1956876/64‑1 (MQ=255) aaCAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGACAGAGCCATCgg > 1:3721730/1‑71 (MQ=255) agaccagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt < 1:2816570/71‑1 (MQ=255) agaccagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt < 1:861290/71‑1 (MQ=255) agaccagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt < 1:1558303/71‑1 (MQ=255) gaccagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATc < 1:242097/71‑1 (MQ=255) accagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt > 1:1202822/1‑69 (MQ=255) accagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt > 1:4410779/1‑69 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:2878326/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:897289/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:3613279/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:544313/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:456877/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCt > 1:2039905/1‑71 (MQ=255) CACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa > 1:2181420‑M1/1‑50 (MQ=255) | AGTACCCGTGTCATCCATCTGTACCGCAGCAACCAGCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCT > Exported/2827242‑2827380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |