| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2827311 = | 90 (1.220) | 5 (0.080) | 3/88 | NT | 5.5% | coding (939/1116 nt) | dcuA | C4‑dicarboxylate antiporter |
| ? | Exported | 2827346 = | 92 (1.420) | coding (904/1116 nt) | dcuA | C4‑dicarboxylate antiporter | |||||
Only 100 of 145 total aligned reads displayed.
GCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGCAG > Exported/2827277‑2827414 | gcactgatgccgatggctctggcactgaacgttaCACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaa > 1:2943188‑M1/35‑71 (MQ=255)gcactgatgccgatggctctggcactgaacgttaCACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaa > 1:1689867‑M1/35‑71 (MQ=255)gCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGa > 1:696152/1‑70 (MQ=255) ctgatgccgatggctctggcactgaacgtttCACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaa < 1:749804‑M1/37‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:3066514/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:1015936/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:2931805/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:3828599/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:2479953/71‑1 (MQ=255) ggTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTc < 1:2252622/71‑1 (MQ=255) gTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCa < 1:2422391/71‑1 (MQ=255) gTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCa < 1:489812/71‑1 (MQ=255) tAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAg < 1:1430495/71‑1 (MQ=255) gTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGc < 1:4132990/71‑1 (MQ=255) ggCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGc > 1:2204071/1‑68 (MQ=255) ggCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:1999472/70‑1 (MQ=255) gCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCaga < 1:4524420/71‑1 (MQ=255) aGAATGATCAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaaa < 1:4656706/55‑1 (MQ=255) aGAATGAACAGACCAGAAACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGc > 1:3968777/1‑71 (MQ=255) gAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGcc < 1:4614595/71‑1 (MQ=255) aTGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:2415539/1‑71 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGaaa > 1:4083983/1‑51 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:1153702/1‑70 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:3250940/1‑70 (MQ=255) tGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCAt > 1:847469/1‑70 (MQ=255) aaCAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGtt > 1:3880218/1‑53 (MQ=255) aaCAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGACAGAGCCATCgg > 1:3721730/1‑71 (MQ=255) agaccagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt < 1:2816570/71‑1 (MQ=255) gaccagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATc < 1:242097/71‑1 (MQ=255) accagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt > 1:1202822/1‑69 (MQ=255) accagacACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCAt > 1:4410779/1‑69 (MQ=255) ttcaccgctgaccgctgttgcttctttcgctgcggtgTAACGTTCAGTGCCAGAGCCATCGGCATCAGTGc > 1:1689867‑M2/38‑71 (MQ=255) ttcaccgctgaccgctgttgcttctttcgctgcggtgAAACGTTCAGTGCCAGAGCCATCGGCATCAg < 1:749804‑M2/31‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:456877/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:3613279/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:544313/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa < 1:897289/51‑1 (MQ=255) acacCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCt > 1:2039905/1‑71 (MQ=255) caccgctgaccgctgttgcttctttcgctgcggtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTg > 1:104878‑M2/36‑68 (MQ=255) CACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa > 1:3861419‑M1/1‑50 (MQ=255) ACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCaga < 1:3343988‑M1/51‑1 (MQ=255) ACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCaga < 1:2679934‑M1/51‑1 (MQ=255) ACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCaga < 1:3936663‑M1/51‑1 (MQ=255) ACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCaga < 1:1972572‑M1/51‑1 (MQ=255) ACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCttt < 1:2463234‑M1/71‑1 (MQ=255) ACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCttt < 1:2227672‑M1/71‑1 (MQ=255) CCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa > 1:4045318‑M1/1‑48 (MQ=255) CCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCa > 1:929211‑M1/1‑48 (MQ=255) CGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTg < 1:2817591‑M1/71‑1 (MQ=255) aGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCgg > 1:686737/1‑71 (MQ=255) aGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCgg < 1:2635170/71‑1 (MQ=255) gAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTg > 1:3899589/1‑71 (MQ=255) gAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTg < 1:2580149/71‑1 (MQ=255) aaaGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTg > 1:76683/1‑70 (MQ=255) aagaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTg > 1:1079068/1‑69 (MQ=255) aagaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTg > 1:4051526/1‑69 (MQ=255) aagaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTg > 1:3547870/1‑69 (MQ=255) agaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGc > 1:1842562/1‑49 (MQ=255) agaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGc > 1:1483643/1‑49 (MQ=255) agaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGc > 1:2235315/1‑49 (MQ=255) agaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGt > 1:3661528/1‑66 (MQ=255) agaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGt > 1:3720264/1‑66 (MQ=255) agaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGt > 1:2679357/1‑66 (MQ=255) agaagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGt > 1:2162007/1‑66 (MQ=255) aagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGc < 1:2183390/40‑1 (MQ=255) aagCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTg > 1:1608332/1‑60 (MQ=255) agCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCt < 1:3901226/71‑1 (MQ=255) agCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCt < 1:1499550/71‑1 (MQ=255) agCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCt < 1:3591097/71‑1 (MQ=255) agCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCt < 1:4277850/71‑1 (MQ=255) gCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCagag < 1:60229/37‑1 (MQ=255) gCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTg < 1:4153546/71‑1 (MQ=255) aaCAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCt > 1:1772194/1‑68 (MQ=255) aaCAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTga < 1:3845908/70‑1 (MQ=255) tctttcgctgcggtgAAACGTTCAGTGCCAGAGCCATCGGCATCAg < 1:3003922‑M2/31‑1 (MQ=255) agcggtcagcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTga > 1:860217/1‑67 (MQ=255) cggtcagcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCg > 1:427840/1‑53 (MQ=255) cggtcagcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCg > 1:3798174/1‑53 (MQ=255) cggtcagcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCg > 1:210104/1‑53 (MQ=255) cggtcagcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCg > 1:4701978/1‑53 (MQ=255) cagcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTAcag > 1:2374611/1‑69 (MQ=255) agcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGt > 1:4557894/1‑50 (MQ=255) agcggtGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTAcag > 1:814059/1‑68 (MQ=255) gcggtgAAACGTTCAGTGCCAGAGCCATCGGCATCa > 1:1946620‑M2/7‑36 (MQ=255) gcggtgAAACGTTCAGTGCCAGAGCCATCGGCATCa > 1:1893517‑M2/7‑36 (MQ=255) cggtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAg > 1:1640519‑M2/6‑53 (MQ=255) cggtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAg > 1:4594663‑M2/6‑53 (MQ=255) gtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagagc < 1:1368403‑M2/67‑1 (MQ=255) gtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagag > 1:327428‑M2/4‑69 (MQ=255) gtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagag > 1:3346947‑M2/4‑69 (MQ=255) gtgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagag > 1:1572164‑M2/4‑69 (MQ=255) tgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagagcag < 1:2062615‑M2/69‑1 (MQ=255) tgAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagagcag < 1:845869‑M2/69‑1 (MQ=255) gAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGagag > 1:3265215‑M2/2‑57 (MQ=255) gAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTAcagca > 1:752589‑M2/2‑64 (MQ=255) gAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagagca < 1:1971861‑M2/68‑1 (MQ=255) aaaCGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCg > 1:1779090/1‑41 (MQ=255) aaaCGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCg > 1:769512/1‑41 (MQ=255) aaaCGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTa > 1:2504694/1‑58 (MQ=255) aaaCGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACagcagagcag > 1:1871593/1‑69 (MQ=255) | GCGTCGGGTAGGTCGGCAGAATGAACAGACCAGACACCGCAGCGAAAGAAGCAACAGCGGTCAGCGGTGAAACGTTCAGTGCCAGAGCCATCGGCATCAGTGCTTTTGCGGTTGCAGCCTGAGAGTACAGCAGAGCAG > Exported/2827277‑2827414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |