| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 147275 = | 49 (0.830) | 4 (0.080) | 3/90 | NT | 7.6% | coding (431/2430 nt) | hrpB | predicted ATP‑dependent helicase |
| ? | Exported | 147295 = | 54 (1.040) | coding (451/2430 nt) | hrpB | predicted ATP‑dependent helicase | |||||
AGCATTTGCTGCAAGCGGTCGTTGTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/147347‑147275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccttAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGCAAATGCTGCCAGAAGCGCCTGTCG > Exported/147295‑147364 AGCATTTGCTGCAAGCGGTCGTTGTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGACC > 1:1957445/1‑71AGCATTTGCTGCAAGCGGTCGTTGTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGACC > 1:3285015/1‑71 GCATTTGCTGCAAGCGGTCGTTGTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGACCT > 1:2455564/1‑71 GCATTTGCTGCAAGCGGTCGTTGTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGACCT > 1:2873952/1‑71 CATTTGCTGCAAGCGGTCGTTGTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGACCTT > 1:2050234/1‑71 GTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGAC < 1:975685/47‑1 GTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGAC < 1:641485/47‑1 GTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGAC < 1:559107/47‑1 GCAGTTTAAGGTCATCACGCAGACCTTAAACTGCTGATTATGTCGGCTACCC < 1:2323282/52‑1 CAGTTTAAGGTCATCACGCAGACCTTAAACTGCTGATTATGTCGGCTACCC < 1:847100/51‑1 AGTTTAAGGTCATCACGCAGACCTTAAACTGCTGATTATGTCGGCTACCCTG > 1:388909/1‑52 AAGGTCATCACGCAGACCTTAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGCAAAT < 1:921677/70‑1 GACCTTAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTT > 1:3468129/1‑47 TTAAACTGCTGATTATGTCGGGTACCCTGGACAACGACCGCTTGCAGCAAATGCTGCCAGAAGCGC > 1:3549897/1‑66 TTAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGC < 1:302206/48‑1 TTAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGC < 1:3370243/48‑1 TTAAACTGCTGATTATGTCGGCTACCCTGGACAAC < 1:2198502/35‑1 TAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGCAAATGCTGCCAGAAGCGCCTGTCG > 1:2372234/1‑71 TAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGCAAATGCTGCCAGAAGCGCCTGTC > 1:406353/1‑70 AGCATTTGCTGCAAGCGGTCGTTGTCCAGGGTAGCCGACATAATCAGCAGTTTAAGGTCATCACGCAGACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/147347‑147275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccttAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGCAAATGCTGCCAGAAGCGCCTGTCG > Exported/147295‑147364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |