| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 509765 = | 93 (1.580) | 4 (0.080) | 3/90 | NT | 5.9% | coding (1424/1434 nt) | ybhI | predicted transporter |
| ? | Exported | 509805 = | 46 (0.880) | intergenic (+30/‑153) | ybhI/ybhJ | predicted transporter/predicted hydratase | |||||
AGTGACTGGGGTGAGCGAACGCAGACGCAGCACATGCAACTTGAAGTATGACGAGAATATTTACAGCATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/509835‑509765‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGC > Exported/509805‑509873 AGTGACTGGGGTGAGCGAACGCAGACGCAGCACATGCAACTTGAAGTATGACGAGAATATTTACAGCATG > 1:955311/1‑70 AGACGCAGCACATGCAACTTGAAGTATGACGAGAATATTTACAGCATGTGCTGCGTCTGCGTTCGCTCACC > 1:1705734/1‑71 ACGCAGCACATGCAACTTGAAGTATGACGAGAATATTTACAGCATGTGCTGCGTCTGCGTTCGCTCACCC > 1:616355/1‑70 CACATGCAACTTGAAGTATGACGAGAATATTTACAGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCAC > 1:2819106/1‑71 CACATGCAACTTGAAGTATGACGAGAATATTTACAGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCAC > 1:768489/1‑71 CATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTG < 1:1468307/70‑1 CATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTG < 1:3267566/70‑1 ATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTA < 1:1833889/45‑1 ATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTA < 1:2113911/45‑1 TGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATG < 1:2299394/42‑1 GTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGT > 1:1891753/1‑42 TGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGC > 1:2710480/1‑70 TGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGT > 1:2090397/1‑41 TGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGT > 1:3527627/1‑41 TGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGT > 1:3619760/1‑41 TGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGT > 1:3659815/1‑41 AGTGACTGGGGTGAGCGAACGCAGACGCAGCACATGCAACTTGAAGTATGACGAGAATATTTACAGCATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/509835‑509765‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGC > Exported/509805‑509873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |