| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 509765 = | 93 (1.580) | 4 (0.080) | 3/90 | NT | 5.9% | coding (1424/1434 nt) | ybhI | predicted transporter |
| ? | Exported | 509805 = | 46 (0.880) | intergenic (+30/‑153) | ybhI/ybhJ | predicted transporter/predicted hydratase | |||||
TGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGC > Exported/509735‑509873 | tgtgGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:1938224/1‑71 (MQ=255)tgtgGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:311636/1‑71 (MQ=255)gtgactggggtgagcgaacgcagacgcagcACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:2819106‑M1/31‑71 (MQ=255)gtgactggggtgagcgaacgcagacgcagcACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:768489‑M1/31‑71 (MQ=255) gtggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGtgctgc > 1:1968228/1‑71 (MQ=255) gtggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGtgctgc > 1:508661/1‑71 (MQ=255) tggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcg > 1:462478/1‑71 (MQ=255) tggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcg > 1:3359160/1‑71 (MQ=255) gtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgt < 1:2998591/70‑1 (MQ=255) gtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgt < 1:2161770/70‑1 (MQ=255) gggtgagcgaacgcagacgcagcACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgt > 1:616355‑M1/24‑70 (MQ=255) tggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct > 1:1449679/1‑71 (MQ=255) tggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct < 1:2298022/71‑1 (MQ=255) ggtgagcgaacgcagacgcagcACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct > 1:1705734‑M1/23‑71 (MQ=255) aaTATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcg > 1:856644/1‑71 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt > 1:3086703/1‑71 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt < 1:917437/71‑1 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt < 1:2116646/71‑1 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt < 1:995754/71‑1 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt > 1:1961096/1‑71 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt < 1:1653340/71‑1 (MQ=255) cTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTc > 1:107557/1‑68 (MQ=255) cTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCt < 1:3621019/71‑1 (MQ=255) gATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTc < 1:3579252/66‑1 (MQ=255) gATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTc < 1:3264726/66‑1 (MQ=255) aTCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAc < 1:1524919/71‑1 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGtgct > 1:1044484/1‑52 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAc > 1:1194290/1‑70 (MQ=255) agacgcagcacatgcaacttgaagtatgacgagaatatttacagcatgtGCTGCGTCTGCGTTCGCTCAcc > 1:1705734‑M2/50‑71 (MQ=255) cGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAccc > 1:1774323/1‑71 (MQ=255) ggCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAccc < 1:626308/70‑1 (MQ=255) ggCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAccc > 1:2297239/1‑70 (MQ=255) ggCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAccc < 1:3330386/70‑1 (MQ=255) acgcagcacatgcaacttgaagtatgacgagaatatttacagcatgtGCTGCGTCTGCGTTCGCTCAccc > 1:616355‑M2/48‑70 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct < 1:1743011/52‑1 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct < 1:389873/52‑1 (MQ=255) gAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGt < 1:2643201/69‑1 (MQ=255) gAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGt < 1:335862/69‑1 (MQ=255) gAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTc < 1:2825775/70‑1 (MQ=255) gAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCa < 1:3274627/71‑1 (MQ=255) cacatgcaacttgaagtatgacgagaatatttacagcatgtGCTGCGTCTGCGTTCGCTCACCCCAGTCac > 1:2819106‑M2/42‑71 (MQ=255) cacatgcaacttgaagtatgacgagaatatttacagcatgtGCTGCGTCTGCGTTCGCTCACCCCAGTCac > 1:768489‑M2/42‑71 (MQ=255) aaCATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:250291/1‑42 (MQ=255) CATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCact > 1:955311‑M1/1‑70 (MQ=255) gTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTAt > 1:144296/1‑71 (MQ=255) tAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCt < 1:2937177/50‑1 (MQ=255) tAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTAt < 1:2239733/70‑1 (MQ=255) tAAATATTATCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCt < 1:2674322/50‑1 (MQ=255) aaTATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt < 1:2769807/70‑1 (MQ=39) aaTATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt < 1:1064497/70‑1 (MQ=39) aaTATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt < 1:2571804/70‑1 (MQ=39) aaTATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt < 1:2465241/70‑1 (MQ=39) aaTATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt < 1:35214/70‑1 (MQ=39) aaTATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt < 1:3675437/70‑1 (MQ=39) atatTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTaa < 1:2048762/71‑1 (MQ=35) tatTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGt < 1:397122/55‑1 (MQ=35) tatTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTaa > 1:3409462/1‑70 (MQ=35) tatTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTa < 1:2943497/69‑1 (MQ=35) tatTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTa < 1:3081386/69‑1 (MQ=35) atTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTc > 1:2243430/1‑42 (MQ=38) atTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTc > 1:1254361/1‑42 (MQ=38) catgtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTg < 1:3267566‑M2/65‑1 (MQ=255) catgtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTg < 1:1468307‑M2/65‑1 (MQ=255) atgtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTa < 1:1833889‑M2/41‑1 (MQ=255) atgtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTa < 1:2113911‑M2/41‑1 (MQ=255) tgtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATg < 1:2299394‑M2/39‑1 (MQ=255) gtGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt > 1:1891753‑M2/3‑42 (MQ=255) tGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt > 1:3527627‑M2/2‑41 (MQ=255) tGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt > 1:3659815‑M2/2‑41 (MQ=255) tGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt > 1:2090397‑M2/2‑41 (MQ=255) tGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGt > 1:3619760‑M2/2‑41 (MQ=255) tGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGc > 1:2710480‑M2/2‑70 (MQ=255) | TGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGC > Exported/509735‑509873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |