| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 509765 = | 93 (1.580) | 4 (0.080) | 3/90 | NT | 5.9% | coding (1424/1434 nt) | ybhI | predicted transporter |
| ? | Exported | 509805 = | 46 (0.880) | intergenic (+30/‑153) | ybhI/ybhJ | predicted transporter/predicted hydratase | |||||
Only 100 of 135 total aligned reads displayed.
CTGACGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCA > Exported/509695‑509833 | cTGACGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGaa > 1:588592/1‑71 (MQ=255) gcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagca > 1:2710480‑M1/70‑70 (MQ=255) aCGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAAc < 1:990499/69‑1 (MQ=255) aCGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAAc < 1:3035596/69‑1 (MQ=255) aCGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACa < 1:1008022/70‑1 (MQ=255) aCGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACAt < 1:950572/71‑1 (MQ=255) cGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACa > 1:1959404/1‑69 (MQ=255) cGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACAt > 1:1676573/1‑70 (MQ=255) gATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGc > 1:1875013/1‑71 (MQ=255) caagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcACATg < 1:3267566‑M1/5‑1 (MQ=255) caagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcACATg < 1:1468307‑M1/5‑1 (MQ=255) ttAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTa < 1:1383490/71‑1 (MQ=255) cTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACa < 1:488270/55‑1 (MQ=255) gTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTc < 1:2917679/71‑1 (MQ=255) tCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACtt > 1:3665206/1‑70 (MQ=255) tCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACtt > 1:2817963/1‑70 (MQ=255) tCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACtt > 1:273719/1‑70 (MQ=255) tCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACtt > 1:1551107/1‑70 (MQ=255) tCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACtt < 1:1559647/70‑1 (MQ=255) tacataagtaagtgactggggtgagcgaacgcagacgcagcACAt < 1:1833889‑M1/4‑1 (MQ=255) tacataagtaagtgactggggtgagcgaacgcagacgcagcACAt < 1:2113911‑M1/4‑1 (MQ=255) acataagtaagtgactggggtgagcgaacgcagacgcagca > 1:3527627‑M1/41‑41 (MQ=255) acataagtaagtgactggggtgagcgaacgcagacgcagca > 1:2090397‑M1/41‑41 (MQ=255) acataagtaagtgactggggtgagcgaacgcagacgcagca > 1:3619760‑M1/41‑41 (MQ=255) aCCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTc > 1:1786260/1‑69 (MQ=255) aCCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCaa < 1:2304268/71‑1 (MQ=255) aCCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCa < 1:3671627/70‑1 (MQ=255) gccTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCa < 1:1649981/68‑1 (MQ=255) ccTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACa < 1:451298/41‑1 (MQ=255) ccTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCa < 1:1255429/61‑1 (MQ=255) ccTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCa < 1:1956300/61‑1 (MQ=255) cTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGtt < 1:2245049/71‑1 (MQ=255) tCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTg > 1:2072683/1‑44 (MQ=255) tCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGt < 1:538052/45‑1 (MQ=255) tCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAat > 1:3458185/1‑49 (MQ=255) tCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTg > 1:412438/1‑71 (MQ=255) tCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTg > 1:3121197/1‑71 (MQ=255) tCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTg > 1:583086/1‑71 (MQ=255) cGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTg > 1:3578442/1‑70 (MQ=255) cGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTg > 1:1176311/1‑70 (MQ=255) ggCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa > 1:3185331/1‑71 (MQ=255) gagtgtGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAt > 1:1826359/3‑71 (MQ=255) gagtgtGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAt > 1:1821978/3‑71 (MQ=255) gCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAt > 1:1768875/1‑71 (MQ=255) cGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtg > 1:3289101/1‑71 (MQ=255) gtgtGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgt > 1:2436043/1‑71 (MQ=255) tgtgGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTc < 1:2243744/59‑1 (MQ=255) tgtgGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:311636/1‑71 (MQ=255) tgtgGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:1938224/1‑71 (MQ=255) gtgactggggtgagcgaacgcagacgcagcACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:2819106‑M1/31‑71 (MQ=255) gtgactggggtgagcgaacgcagacgcagcACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgtg > 1:768489‑M1/31‑71 (MQ=255) ggtggtggAATATGCTGATCGGCTGGAACATGCTGTAAATAtt > 1:3256368/1‑43 (MQ=255) gtggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGtgctgc > 1:508661/1‑71 (MQ=255) gtggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGtgctgc > 1:1968228/1‑71 (MQ=255) tggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcg > 1:462478/1‑71 (MQ=255) tggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcg > 1:3359160/1‑71 (MQ=255) ggtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATa > 1:3315200/1‑49 (MQ=255) gtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgt < 1:2161770/70‑1 (MQ=255) gtggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgt < 1:2998591/70‑1 (MQ=255) tggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct < 1:2298022/71‑1 (MQ=255) tggAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct > 1:1449679/1‑71 (MQ=255) aaTATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcg > 1:856644/1‑71 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt < 1:2116646/71‑1 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt > 1:1961096/1‑71 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt < 1:917437/71‑1 (MQ=255) atatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtctgcgt < 1:1653340/71‑1 (MQ=255) tatGCTGATCGGCTGGATCATGCTGTAAATATTCTCGTCATACTTCAAGTTGc < 1:2829499/53‑1 (MQ=255) tatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCa < 1:872364/47‑1 (MQ=255) tatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCa < 1:2552714/47‑1 (MQ=255) tatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGc < 1:256232/53‑1 (MQ=255) tatGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGc < 1:2272524/53‑1 (MQ=255) tGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAt > 1:736762/1‑53 (MQ=255) cTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTc > 1:107557/1‑68 (MQ=255) cTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCt < 1:3621019/71‑1 (MQ=255) tGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCaa > 1:3359225/1‑43 (MQ=255) gATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTc < 1:3264726/66‑1 (MQ=255) aTCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAc < 1:1524919/71‑1 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:1022142/46‑1 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:2799008/46‑1 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:3058791/46‑1 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:233629/46‑1 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:2635806/46‑1 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGtgct > 1:1044484/1‑52 (MQ=255) tCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAc > 1:1194290/1‑70 (MQ=255) cGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:1248304/45‑1 (MQ=255) ggCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAccc < 1:626308/70‑1 (MQ=255) ggCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAccc > 1:2297239/1‑70 (MQ=255) ggCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCAccc < 1:3330386/70‑1 (MQ=255) gCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:2062634/43‑1 (MQ=255) gCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCa < 1:786212/43‑1 (MQ=255) cTGGAACATGCTGTAAATATTCTCGTCATACTTCaa < 1:2701448/36‑1 (MQ=255) cTGGAACATGCTGTAAATATTCTCGTCATACTTCaa < 1:1934397/36‑1 (MQ=255) cTGGAACATGCTGTAAATATTCTCGTCATACTTCaa < 1:121720/36‑1 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGt > 1:3604886/1‑36 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGt > 1:771647/1‑36 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGt > 1:1885829/1‑36 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGt > 1:3379076/1‑36 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct < 1:1743011/52‑1 (MQ=255) ggAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGctgcgtct < 1:389873/52‑1 (MQ=255) aaCATGCTGTAAATATTCTCGTCATACTTCAAGTTGCAtgt > 1:751132/1‑41 (MQ=255) | CTGACGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAAATATTCTCGTCATACTTCAAGTTGCATGTGCTGCGTCTGCGTTCGCTCACCCCAGTCA > Exported/509695‑509833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |