| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1330180 = | 57 (0.970) | 4 (0.080) | 3/84 | NT | 9.0% | intergenic (‑20/+35) | wcaJ/cpsG | predicted UDP‑glucose lipid carrier transferase/phosphomannomutase |
| ? | Exported | 1330204 = | 34 (0.700) | intergenic (‑44/+11) | wcaJ/cpsG | predicted UDP‑glucose lipid carrier transferase/phosphomannomutase | |||||
GAAGCGCGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1330256‑1330180‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtaagggAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGCACA > Exported/1330204‑1330269 GAAGCGCGAACGCGAACTCTGCTGACGGTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGG < 1:1859074/70‑1 AAGCGCGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGT < 1:751346/71‑1 CGCGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAG > 1:1121531/1‑71 CGCGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAG > 1:1616934/1‑71 CGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAGGG < 1:767729/71‑1 CGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAGGG < 1:2216975/71‑1 CGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAGGG < 1:2941945/71‑1 TGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAG > 1:3277657/1‑56 GTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAGG < 1:2507492/50‑1 GAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGT < 1:401671/40‑1 GAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGT < 1:1986520/40‑1 CCTTACCCCACTGCGGGTAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCG < 1:758081/70‑1 CCTTACCCCACTGCGGGTAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCG < 1:2816884/70‑1 CTTACCCCACTGCGGGTAAGGGAAGATCCGACATTACTCGT < 1:1441730/41‑1 CTTACCCCACTGCGGGTAAGGGAAGATCCGACATTACTC > 1:1813771/1‑39 GGGTAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGG < 1:1124659/71‑1 GGGTAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGG < 1:2646286/71‑1 GGTAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGC < 1:51584/71‑1 GGTAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGC < 1:1385625/71‑1 GTAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGCA < 1:169250/71‑1 TAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGCAC < 1:2866791/71‑1 TAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGCAC < 1:799987/71‑1 TAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCG < 1:2634183/49‑1 TAAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCG < 1:1558345/49‑1 AAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGCACA > 1:2276253/1‑71 AAGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCG < 1:992569/48‑1 AGGGAAGATCCGACATTACTCGTTCAGCAACGTCAGCA < 1:1453847/38‑1 GAAGCGCGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAATGTCGGATCTTCCCTTACCCCACTGCGGGTAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1330256‑1330180‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtaagggAAGATCCGACATTACTCGTTCAGCAACGTCAGCAGAGTTCGCGTTCGCGCTTCCATCAGCGGCACA > Exported/1330204‑1330269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |