| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2923517 = | 74 (1.250) | 5 (0.090) | 4/96 | NT | 5.5% | coding (1705/2856 nt) | valS | valyl‑tRNA synthetase |
| ? | Exported | 2923556 = | 102 (1.840) | coding (1666/2856 nt) | valS | valyl‑tRNA synthetase | |||||
GGCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2923589‑2923517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTTT > Exported/2923556‑2923625 GGCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATAT < 1:3547575/71‑1 GCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATATG > 1:934757/1‑71 GCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATATG < 1:2785744/71‑1 GCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATATG > 1:3412123/1‑71 ATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATAT > 1:687741/1‑41 ATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATAT > 1:3109159/1‑41 CAAATCCAAGGGTAACGTTATCGACCCACTGGATATGGACATCTTCTGGCCTTCGTCATCACGAAT < 1:477602/66‑1 AAATCCAAGGGTAACGTTATCGACCCACTGGATATGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCC > 1:2775049/1‑71 AAATCCAAGGGTAACGTTATCGACCCACTGGATATGGACATCTTCTGGCCTTCGTCATCACGAATCAGGC > 1:3399248/1‑70 AAATCCAAGGGTAACGTTATCGACCCACTGGATATGGACATCTTCTGGCCTTCGTCATCACGAA < 1:1383477/64‑1 TTATCGACCCACTGGATATGGACATCTTCTGGCCTTCGTCATCACGAATCAGGC > 1:980807/1‑54 TGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGG < 1:3452582/70‑1 TGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACG > 1:3252416/1‑50 TGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACG > 1:3125846/1‑50 TGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACG > 1:1871095/1‑50 GGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGT < 1:853217/70‑1 GGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTG > 1:1841371/1‑52 GGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTG > 1:1651829/1‑52 GACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTTT < 1:2771257/71‑1 GACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTTT < 1:3655394/71‑1 GACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTTT < 1:1433077/71‑1 GACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTT < 1:1703672/70‑1 GACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGG < 1:3514426/54‑1 GGCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2923589‑2923517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTTT > Exported/2923556‑2923625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |