| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2923517 = | 74 (1.250) | 5 (0.090) | 4/96 | NT | 5.5% | coding (1705/2856 nt) | valS | valyl‑tRNA synthetase |
| ? | Exported | 2923556 = | 102 (1.840) | coding (1666/2856 nt) | valS | valyl‑tRNA synthetase | |||||
Only 100 of 135 total aligned reads displayed.
TTCTGGCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTTT > Exported/2923494‑2923625 | ttCTGGCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtcttct < 1:3398916/71‑1 (MQ=255)ttCTGGCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtcttct < 1:2218859/71‑1 (MQ=255)ttCTGGCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtctt < 1:3444724/69‑1 (MQ=255) cTGGCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTgg > 1:3689758/1‑71 (MQ=255) gCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtcttct > 1:3641025/1‑66 (MQ=255) gCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGcc < 1:361354/70‑1 (MQ=255) cAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTg < 1:3408459/66‑1 (MQ=255) cAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTg < 1:1376755/66‑1 (MQ=255) cAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCtt < 1:3465691/71‑1 (MQ=255) cAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCtt < 1:3573042/71‑1 (MQ=255) cGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGt > 1:1053074/1‑71 (MQ=255) cGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGt > 1:3002642/1‑71 (MQ=255) cGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGt > 1:3489565/1‑71 (MQ=255) gAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtcttc < 1:812191/60‑1 (MQ=255) gAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtcttc < 1:2313843/60‑1 (MQ=255) gAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtcttc < 1:454448/60‑1 (MQ=255) aaaTACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGa > 1:2401990/1‑52 (MQ=255) aaaTACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtcttc < 1:2901101/59‑1 (MQ=255) aaaTACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGtc < 1:1816777/70‑1 (MQ=255) aaTACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGtcat > 1:1214468/1‑71 (MQ=255) aTACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGtcatc < 1:3192252/71‑1 (MQ=255) aTACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGtcatc < 1:757797/71‑1 (MQ=255) aCCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCAc > 1:673729/1‑71 (MQ=255) ccGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACg < 1:642097/71‑1 (MQ=255) tCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCAacacc > 1:153942/1‑67 (MQ=255) tCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGaa > 1:2840897/1‑70 (MQ=255) tCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAAt > 1:3264791/1‑71 (MQ=255) aaCCATATCCAGTGGGTAGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAAt > 1:192626/1‑69 (MQ=255) CATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGc < 1:2785744‑M1/71‑1 (MQ=255) CATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGc > 1:934757‑M1/1‑71 (MQ=255) aaatccaagggtaacgttatcgacccactggatatggACATCTTCTGGCCTTCGTCATCACGaa < 1:1383477‑M2/27‑1 (MQ=255) aaatccaagggtaacgttatcgacccactggatatggACATCTTCTGGCCTTCGTCATCACGAATCAGGcc > 1:2775049‑M2/38‑71 (MQ=255) aaatccaagggtaacgttatcgacccactggatatggACATCTTCTGGCCTTCGTCATCACGAATCAGGc > 1:3399248‑M2/38‑70 (MQ=255) ATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAt > 1:687741‑M1/1‑41 (MQ=255) ATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAt > 1:3109159‑M1/1‑41 (MQ=255) ATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGcc < 1:3547575‑M1/71‑1 (MQ=255) atCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACAtctt > 1:2637166/1‑42 (MQ=255) atCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCgg > 1:1938004/1‑71 (MQ=255) tCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGa < 1:1665524/60‑1 (MQ=255) tCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGa < 1:2593126/60‑1 (MQ=255) tCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGa < 1:519152/60‑1 (MQ=255) tCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGa < 1:1990876/60‑1 (MQ=255) tCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCTGt < 1:2126725/71‑1 (MQ=255) tCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGt < 1:2571454/71‑1 (MQ=255) tCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGt < 1:1284195/71‑1 (MQ=255) tCCAGTGGGGCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGa < 1:148641/60‑1 (MQ=255) ccAGTGGGTCGATAACGTTACCCTTGTATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGt < 1:52246/70‑1 (MQ=255) cAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTc < 1:2981422/70‑1 (MQ=255) cAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCa > 1:362655/1‑71 (MQ=255) cAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCa > 1:2869029/1‑71 (MQ=255) cAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCa > 1:3657776/1‑71 (MQ=255) cAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCa < 1:1366330/71‑1 (MQ=255) cAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCa < 1:750479/71‑1 (MQ=255) cAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCa < 1:342630/71‑1 (MQ=255) aGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCAt < 1:963273/71‑1 (MQ=255) aGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCAt < 1:2381467/71‑1 (MQ=255) tGGGTCGATATCGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATc < 1:473388/58‑1 (MQ=255) tCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAg < 1:178662/56‑1 (MQ=255) tCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCTGGTCATGTAAAc > 1:3547244/1‑71 (MQ=255) cGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACg > 1:3349587/1‑71 (MQ=255) gATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGt < 1:62254/65‑1 (MQ=255) gATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGt < 1:902202/65‑1 (MQ=255) gATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGt < 1:2302933/65‑1 (MQ=255) gATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACgg > 1:3428718/1‑71 (MQ=255) gATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACg < 1:1228638/70‑1 (MQ=255) aTAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATc > 1:2576066/1‑51 (MQ=255) aTAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATc > 1:672669/1‑51 (MQ=255) aTAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATc > 1:319584/1‑51 (MQ=255) aTAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGcc < 1:1067925/56‑1 (MQ=255) aTAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGcc < 1:2980986/56‑1 (MQ=255) ttatcgacccactggatatggACATCTTCTGGCCTTCGTCATCACGAATCAGGc > 1:980807‑M2/22‑54 (MQ=255) tAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTaa > 1:2793405/1‑65 (MQ=255) tAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGgtg > 1:638592/1‑71 (MQ=255) tAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGgtg > 1:405872/1‑71 (MQ=255) tAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTAATCACGAATCAGGCCGGTCATGTAAACGgtg > 1:1496937/1‑71 (MQ=255) aCGTTACCCTTGGATTTGGATATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGtgtg > 1:1002297/1‑71 (MQ=255) ttACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGaa < 1:503680/71‑1 (MQ=255) tACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAAc > 1:158404/1‑71 (MQ=255) cccTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACg < 1:1949239/70‑1 (MQ=255) cccTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCAGGTCATGTAAACGGTGTGGAACgg < 1:1666662/71‑1 (MQ=255) ccTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACgg > 1:2851989/1‑70 (MQ=255) ccTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGc < 1:371950/71‑1 (MQ=255) ccTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGc < 1:2884707/71‑1 (MQ=255) ccTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGc < 1:3610329/71‑1 (MQ=255) ggATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCt > 1:2859466/1‑71 (MQ=255) ggATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCt > 1:3153579/1‑71 (MQ=255) gATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTg < 1:2515626/71‑1 (MQ=255) gATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTg < 1:2358836/71‑1 (MQ=255) ttGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCgg > 1:2155717/1‑71 (MQ=255) ttGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCgg > 1:1612685/1‑71 (MQ=255) ttGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCgg > 1:2578498/1‑71 (MQ=255) tggACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACg > 1:3252416‑M2/4‑50 (MQ=255) tggACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACg > 1:1871095‑M2/4‑50 (MQ=255) tggACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACg > 1:3125846‑M2/4‑50 (MQ=255) ggACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGgtg > 1:1841371‑M2/3‑52 (MQ=255) ggACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGt < 1:853217‑M2/68‑1 (MQ=255) gACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTgg < 1:3514426‑M2/53‑1 (MQ=255) gACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGttt < 1:1433077‑M2/70‑1 (MQ=255) gACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGttt < 1:3655394‑M2/70‑1 (MQ=255) gACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGtt < 1:1703672‑M2/69‑1 (MQ=255) | TTCTGGCAGCGAAATACCGTCAACCATATCCAGTGGGTCGATAACGTTACCCTTGGATTTGGACATCTTCTGGCCTTCGTCATCACGAATCAGGCCGGTCATGTAAACGGTGTGGAACGGCACCTGCGGTTT > Exported/2923494‑2923625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |