| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 715224 = | 56 (0.950) | 8 (0.150) | 3/94 | NT | 10.9% | coding (931/1209 nt) | mdtH | predicted drug efflux system |
| ? | Exported | 715252 = | 79 (1.450) | coding (903/1209 nt) | mdtH | predicted drug efflux system | |||||
TAGCTGCCGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCA > Exported/715154‑715292 | taGCTGCCGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGa > 1:3378025/1‑71 (MQ=255) gctgggctgttgataatgtcattaagcatgatgccggtgggcatggtcagcggcctgcaacaacttttca > 1:1370090‑M1/70‑70 (MQ=255) gctgggctgttgataatgtcattaagcatgatgccggtgggcatggtcagcggcctgcaacaacttttcAc < 1:363412‑M1/2‑1 (MQ=255) gCTGCCGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGAcc < 1:809351/71‑1 (MQ=255) ctgggctgttgataatgtcattaagcatgatgccggtgggcatggtcagcggcctgcaacaacttttcAcc > 1:2177511‑M1/69‑71 (MQ=255) ctgggctgttgataatgtcattaagcatgatgccggtgggcatggtcagcggcctgcaacaacttttcAcc > 1:3091764‑M1/69‑71 (MQ=255) ccGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGa > 1:593709/1‑70 (MQ=255) gcgAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGata > 1:3692326/1‑70 (MQ=255) gCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGAc > 1:744711/1‑70 (MQ=255) gTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACaaa > 1:682311/1‑71 (MQ=255) tCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAAt < 1:89062/71‑1 (MQ=255) tCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAAt < 1:2617292/71‑1 (MQ=255) cGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCa < 1:66143/71‑1 (MQ=255) cGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCa < 1:3342184/71‑1 (MQ=255) cGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCa < 1:2195103/71‑1 (MQ=255) cAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAggg > 1:289563/1‑71 (MQ=255) gCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGAccc < 1:2931167/46‑1 (MQ=255) gCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGAccc < 1:1136173/46‑1 (MQ=255) gCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGt > 1:3477169/1‑70 (MQ=255) gCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGt > 1:1504503/1‑70 (MQ=255) gCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGt > 1:2846668/1‑70 (MQ=255) gAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGa > 1:1176291/1‑46 (MQ=255) aGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGaa > 1:1935827/1‑69 (MQ=255) aCTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCAGATATAAAACAGACAAATCAGGGTGAAAAgtt < 1:2832694/71‑1 (MQ=255) ttAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgt > 1:1003883/1‑71 (MQ=255) aaGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg > 1:1239807/1‑71 (MQ=255) aaGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg > 1:737959/1‑71 (MQ=255) aaGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg > 1:759773/1‑71 (MQ=255) aGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGc < 1:976292/71‑1 (MQ=255) ggTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCa < 1:2426949/71‑1 (MQ=255) gcatggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGt > 1:3400028‑M1/30‑57 (MQ=255) gcatggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:757487‑M1/30‑60 (MQ=255) gcatggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:725300‑M1/30‑60 (MQ=255) gcatggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:1354220‑M1/30‑60 (MQ=255) catggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:604424‑M1/29‑59 (MQ=255) atggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaaaa < 1:3724410‑M1/33‑1 (MQ=255) atggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaaaa < 1:3579296‑M1/33‑1 (MQ=255) atggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaaaa < 1:2905655‑M1/33‑1 (MQ=255) cACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGcc < 1:966826/70‑1 (MQ=255) cgcgCAGTCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCt > 1:2852284/1‑71 (MQ=255) cgcgCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCa > 1:958310/1‑46 (MQ=255) cgcgCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg < 1:756157/62‑1 (MQ=255) cgcgCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg < 1:493181/62‑1 (MQ=255) cgcgCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCt > 1:1917016/1‑71 (MQ=255) gcAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAgg < 1:1338184/45‑1 (MQ=255) aGGCTCGGCAATGATCGACCCGTTATAAAACAGACAAATCAGGGt > 1:2656266/1‑45 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGt > 1:358350/1‑45 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGt > 1:1106600/1‑45 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGt > 1:3680105/1‑45 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGAcc < 1:578207/70‑1 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:2229014/71‑1 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:1714604/71‑1 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:3610415/71‑1 (MQ=255) aGGCTCGGCAATGACCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:1054980/71‑1 (MQ=255) ggCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:78972/71‑1 (MQ=255) ggCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:1881080/71‑1 (MQ=255) ggCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:1573169/71‑1 (MQ=255) tCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATg > 1:829440/1‑69 (MQ=255) tCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATg > 1:1743523/1‑69 (MQ=255) ggCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCa > 1:3526608/1‑71 (MQ=255) gCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCAc < 1:1573653/71‑1 (MQ=255) gCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCAc < 1:299812/71‑1 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAg < 1:3467337/43‑1 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:2349253/1‑66 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:1975253/1‑66 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCAcc > 1:540395/1‑71 (MQ=255) aaTGATCGACCCGATATAAAACAGACAAATCAGGGt > 1:2505607/1‑36 (MQ=255) aaTCATCGACCCGATATAAAACAGACAAATCAggga > 1:601210/1‑35 (MQ=38) aTGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAgg < 1:3524168/51‑1 (MQ=255) aTGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCgg < 1:2437909/71‑1 (MQ=255) tGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCg > 1:1342778/1‑53 (MQ=255) tGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCg > 1:1000353/1‑53 (MQ=255) gATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGAcc < 1:3183595/58‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1652133/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:3354758/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:959114/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1552520/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1640616/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1641696/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:2410474/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:2477219/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1306602/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:537019/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGcat > 1:3700162/1‑71 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGca < 1:2272327/70‑1 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:3422268/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:871423/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:1252605/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:3606015/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGcatca > 1:566980/1‑71 (MQ=255) | TAGCTGCCGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCA > Exported/715154‑715292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |