| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 715224 = | 56 (0.950) | 8 (0.150) | 3/94 | NT | 10.9% | coding (931/1209 nt) | mdtH | predicted drug efflux system |
| ? | Exported | 715252 = | 79 (1.450) | coding (903/1209 nt) | mdtH | predicted drug efflux system | |||||
Only 100 of 104 total aligned reads displayed.
AGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCC > Exported/715186‑715321 | aGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGaa > 1:1935827/1‑69 (MQ=255) aCTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCAGATATAAAACAGACAAATCAGGGTGAAAAgtt < 1:2832694/71‑1 (MQ=255) ttAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgt > 1:1003883/1‑71 (MQ=255) aaGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg > 1:737959/1‑71 (MQ=255) aaGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg > 1:1239807/1‑71 (MQ=255) aaGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg > 1:759773/1‑71 (MQ=255) ggTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCa < 1:2426949/71‑1 (MQ=255) gcatggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:757487‑M1/30‑60 (MQ=255) gcatggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:725300‑M1/30‑60 (MQ=255) gcatggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:1354220‑M1/30‑60 (MQ=255) catggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaa > 1:604424‑M1/29‑59 (MQ=255) atggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaaaa < 1:2905655‑M1/33‑1 (MQ=255) atggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaaaa < 1:3579296‑M1/33‑1 (MQ=255) atggtcagcggcctgcaacaacttttcACCCGATATAAAACAGACAAATCAGGGTGaaaa < 1:3724410‑M1/33‑1 (MQ=255) cACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGcc < 1:966826/70‑1 (MQ=255) cgcgCAGTCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCt > 1:2852284/1‑71 (MQ=255) cgcgCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg < 1:493181/62‑1 (MQ=255) cgcgCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGttgttg < 1:756157/62‑1 (MQ=255) cgcgCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCt > 1:1917016/1‑71 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGAcc < 1:578207/70‑1 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:3610415/71‑1 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:2229014/71‑1 (MQ=255) aGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:1714604/71‑1 (MQ=255) aGGCTCGGCAATGACCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCa < 1:1054980/71‑1 (MQ=255) ggCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:1573169/71‑1 (MQ=255) ggCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:78972/71‑1 (MQ=255) ggCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:1881080/71‑1 (MQ=255) tCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATg > 1:829440/1‑69 (MQ=255) tCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATg > 1:1743523/1‑69 (MQ=255) ggCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCa > 1:3526608/1‑71 (MQ=255) gCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCAc < 1:1573653/71‑1 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAg < 1:3467337/43‑1 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:1975253/1‑66 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:2349253/1‑66 (MQ=255) cAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCAcc > 1:540395/1‑71 (MQ=255) aTGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAgg < 1:3524168/51‑1 (MQ=255) aTGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCgg < 1:2437909/71‑1 (MQ=255) tGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCg > 1:1000353/1‑53 (MQ=255) tGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCg > 1:1342778/1‑53 (MQ=255) ttttcaccctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:3579296‑M2/27‑1 (MQ=255) ttttcaccctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:2905655‑M2/27‑1 (MQ=255) ttttcaccctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:3724410‑M2/27‑1 (MQ=255) gATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGAcc < 1:3183595/58‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:537019/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1306602/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:3354758/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:959114/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1552520/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:2477219/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:2410474/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1640616/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1641696/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt < 1:1652133/43‑1 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGcat > 1:3700162/1‑71 (MQ=255) aTCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGca < 1:2272327/70‑1 (MQ=255) ttcaccctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCATg > 1:604424‑M2/32‑59 (MQ=255) ttcaccctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:757487‑M2/32‑60 (MQ=255) ttcaccctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:1354220‑M2/32‑60 (MQ=255) ttcaccctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:725300‑M2/32‑60 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:1252605/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:3606015/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:3422268/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAgttgtt > 1:871423/1‑41 (MQ=255) cGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGcatca > 1:566980/1‑71 (MQ=255) accctgatttgtctgttttatatcgggtGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:3400028‑M2/29‑57 (MQ=255) CGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCCCTGACCATGCCCACCGGCATCATGCtt > 1:1000665‑M1/1‑71 (MQ=255) gATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTa < 1:2747309/71‑1 (MQ=255) atatAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGca < 1:725084/61‑1 (MQ=255) tataAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGc > 1:3356879/1‑39 (MQ=255) tataAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGc > 1:3302986/1‑39 (MQ=255) tataAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGc > 1:2070850/1‑39 (MQ=255) ataAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGAc > 1:891763/1‑45 (MQ=255) aaaaCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGa > 1:2612901/1‑70 (MQ=255) aaaCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGCCCATGcc > 1:897530/1‑48 (MQ=255) aaaCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGcc > 1:2387268/1‑48 (MQ=255) aaaCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGcatca < 1:203963/59‑1 (MQ=255) aaCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCAt < 1:1398795/44‑1 (MQ=255) aaCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGccc < 1:2324048/48‑1 (MQ=255) aCAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACAt > 1:3470893/1‑70 (MQ=255) cAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:3648405/1‑44 (MQ=255) cAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGc > 1:3240229/1‑44 (MQ=255) cAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTa > 1:2277678/1‑71 (MQ=255) cAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTa > 1:2611811/1‑71 (MQ=255) gACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGca < 1:3103068/51‑1 (MQ=255) gACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACAt < 1:2122770/67‑1 (MQ=255) gACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACAt < 1:1769915/67‑1 (MQ=255) gACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACAt < 1:852619/67‑1 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATc > 1:899652/1‑70 (MQ=255) aCAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATc > 1:1502378/1‑70 (MQ=255) cAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTa > 1:3011343/1‑67 (MQ=255) aaaTCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATTACATTATCaa > 1:955259/1‑70 (MQ=255) aaaTCAGGGTGAAAAGTTGTTGCAGGCAGCTGACCa < 1:3221393/36‑1 (MQ=255) tCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAAcagc < 1:1149641/71‑1 (MQ=255) tCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAAcagc > 1:3490857/1‑71 (MQ=255) aGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGccc > 1:1488216/1‑36 (MQ=255) ggtGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAAcagcccag > 1:3091764‑M2/4‑71 (MQ=255) ggtGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAAcagcccag > 1:2177511‑M2/4‑71 (MQ=255) gtGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAAcagcccagc < 1:363412‑M2/69‑1 (MQ=255) tGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAAcagcccagc > 1:1370090‑M2/2‑70 (MQ=255) gAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAAcagcccagcc > 1:1248924/1‑70 (MQ=255) | AGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAGGGTGAAAAGTTGTTGCAGGCCGCTGACCATGCCCACCGGCATCATGCTTAATGACATTATCAACAGCCCAGCC > Exported/715186‑715321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |