mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 67 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4636324 = | 110 (1.210) | 5 (0.060) | 4/262 | NT | 4.6% | coding (318/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | 4636375 = | 101 (1.180) | coding (369/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4617850 = | 109 (1.200) | 5 (0.060) | 4/268 | NT | 4.4% | coding (528/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4617871 = | 113 (1.290) | coding (549/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | = 4600101 | 79 (0.870) | 3 (0.030) | 3/262 | NT | 3.6% | coding (89/495 nt) | yjjA | putative DUF2501 family periplasmic protein |
| ? | NC_000913 | = 4600137 | 85 (0.990) | coding (53/495 nt) | yjjA | putative DUF2501 family periplasmic protein | |||||
| * | ? | NC_000913 | 4584195 = | 109 (1.200) | 3 (0.030) | 3/262 | NT | 3.0% | coding (2567/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | 4584232 = | 93 (1.080) | coding (2530/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4542690 | 141 (1.560) | 3 (0.040) | 3/258 | NT | 2.4% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 113 (1.340) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | 4542682 = | 144 (1.590) | 6 (0.070) | 5/258 | NT | 4.6% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 113 (1.340) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4513364 | 91 (1.000) | 3 (0.030) | 3/262 | NT | 3.2% | coding (46/999 nt) | fecC | ferric citrate ABC transporter permease |
| ? | NC_000913 | = 4513381 | 97 (1.130) | coding (29/999 nt) | fecC | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | = 4495164 | 116 (1.280) | 3 (0.030) | 3/262 | NT | 2.5% | coding (542/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| ? | NC_000913 | = 4495173 | 120 (1.400) | coding (551/564 nt) | idnK | D‑gluconate kinase, thermosensitive | |||||
| * | ? | NC_000913 | 4366721 = | 82 (0.910) | 4 (0.050) | 4/264 | NT | 4.7% | coding (53/1302 nt) | dcuA | C4‑dicarboxylate antiporter |
| ? | NC_000913 | 4366744 = | 83 (0.960) | coding (30/1302 nt) | dcuA | C4‑dicarboxylate antiporter | |||||
| * | ? | NC_000913 | = 4339220 | 97 (1.070) | 4 (0.050) | 4/268 | NT | 4.1% | coding (1302/2268 nt) | adiA | arginine decarboxylase |
| ? | NC_000913 | = 4339261 | 91 (1.040) | coding (1261/2268 nt) | adiA | arginine decarboxylase | |||||