New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3246883	32 (0.540)	3 (0.050)	3/262	NT	8.8%	coding (232/777 nt)	exuR	hexuronate regulon transcriptional repressor; autorepressor
	?	NC_000913	= 3246894	32 (0.570)					coding (243/777 nt)	exuR	hexuronate regulon transcriptional repressor; autorepressor

TCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3246729‑3246883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgcCTGCTGATGGCGCGGCTGGTTGGAAACCACATGAATACCTGAACCTTTACGCACTTCGACATAGCCTTCAACTTCCAGCATGATGATGGCTTCACGAACTACCGTACGGCTGACGTTCTTTTCATCGGCAATAAAGCGTTCTGCAGG  <  NC_000913/3246894‑3246748                                                                                                                                                                                                                                                                                                                TCTGGGGGGAGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACC                                                                                                                                                           <  2:28883/149‑1    GGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCTTCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGC                                                                                                                                                        >  1:303746/1‑149    GGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGC                                                                                                                                                        <  2:303746/149‑1     GTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCC                                                                                                                                                       >  1:698869/1‑149                            ACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCCTCATCATGCTGGAAGTTGAAGGCTATGTCGCAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCCTGCTGATGGCGCGGCTGGTT                                                                                                                                <  1:626293/149‑1                                                       CAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCCTGCTGATGGCGCGGCTGGTTGGAAA                                                                                                                           <  1:1005917/127‑1                                                       CAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCCTGCTGATGGCGCGGCTGGTTGGAAA                                                                                                                           >  2:1005917/1‑127                                                                                                                                                      AGCCGCCTGCTGATGGCGCGGCTGGTTGGAAACCACATGAATACCTGAACCTTTACGCACTTCGACATAGCCTTCAACTTCCAGCATGATGATGGCTTCACGAACTACCGTACGGCTGACGTTCTTTTCATCGGCAATAAAGCGTTCTG      >  1:546062/1‑149                                                                                                                                                         CGCCTGCTGATGGCGCGGCTGGTTGGAAACCACATGAATACCTGAACCTTTACGCACTTCGACATAGCCTTCAACTTCCAGCATGATGATGGCTTCACGAACTACCGTACGGCTGACGTTCTTTTCATCGGCAATAAAGCGTGCTGCAG   <  1:476623/149‑1                                                                                                                                                          GCCTGCTGATGGCGCGGCTGGTTGGAAACCACATGAATACCTGAACCTTTACGCACTTAGACATAGCCTTCAACTTCCAGCATGATGATGGCTTCACGAACTTCCGTACGGCTGACGTTCTTTTCATCGGCAATAAAGCGTTCTGCAGG  <  2:36598/149‑1                                                                                                                                                                                                                                                                                                                TCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3246729‑3246883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgcCTGCTGATGGCGCGGCTGGTTGGAAACCACATGAATACCTGAACCTTTACGCACTTCGACATAGCCTTCAACTTCCAGCATGATGATGGCTTCACGAACTACCGTACGGCTGACGTTCTTTTCATCGGCAATAAAGCGTTCTGCAGG  <  NC_000913/3246894‑3246748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.