New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3880427 =166 (2.420)3 (0.050) 3/266 NT 1.9% coding (795/1074 nt) recF gap repair protein
?NC_000913 3880485 = 149 (2.260)coding (737/1074 nt) recF gap repair protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 178 total aligned reads displayed.

CCGCGACGCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGT  >  NC_000913/3880281‑3880573
                                                                                                                                                  |                                                                                                                                                  
ggtatcgcggccgatatggctgatacctgtaagcaatttctccctgagttttctctgactttctctttccagcgcggctgggagaaagagacagaatatgctgaggtgctggaacgtaattttgaacgcgatcgccagctaacctacac                                                                                                                                                  >  2:884394‑M1/147‑149 (MQ=255)
  gcgACGCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGTAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCg                                                                                                                                                <  2:532107/149‑1 (MQ=255)
    gACGCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGgc                                                                                                                                              <  2:806102/149‑1 (MQ=255)
    gACGCTCATCATCAAGCTCAGAGGAAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTAACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGgc                                                                                                                                              <  1:160786/149‑1 (MQ=255)
       gCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCa                                                                                                                                           <  2:1005817/149‑1 (MQ=255)
       gCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCa                                                                                                                                           >  2:480267/1‑149 (MQ=255)
       gCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGGGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCa                                                                                                                                           <  1:132238/149‑1 (MQ=255)
       gCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACAGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTATGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCa                                                                                                                                           <  2:593292/149‑1 (MQ=255)
         gcatcatcaAGCTCAGAGGCAAAATCATCTCTCAGGTAGAGACCCCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCAcc                                                                                                                                         <  2:220393/148‑1 (MQ=255)
           atcatcaAGCTCAGAGGCAAAATCTTCTATCAGTTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCAGTTCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGt                                                                                                                                       <  2:1181097/149‑1 (MQ=255)
           atcatcaAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGATCTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGt                                                                                                                                       <  1:77751/149‑1 (MQ=255)
           atcatcaAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGt                                                                                                                                       >  1:820525/1‑149 (MQ=255)
           atcatcaAGATCAGAGGCAAAATCATCAATCACGTACAGACACCTCCGCCCGCGTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCGCACGCGATAAGGTATCTTCCACCGGCGCACCGt                                                                                                                                       <  1:568681/149‑1 (MQ=255)
            tcatcaAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCTACGCGATAAGGTATCTTCCACCGGCGCACCGTc                                                                                                                                      >  1:1069121/1‑149 (MQ=255)
            tcatcaAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTc                                                                                                                                      >  1:1093306/1‑149 (MQ=255)
            tcatcaAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTc                                                                                                                                      >  1:432979/1‑149 (MQ=255)
             catcaAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCg                                                                                                                                     <  2:424236/149‑1 (MQ=255)
             catcaAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCATAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCg                                                                                                                                     >  2:534345/1‑149 (MQ=255)
                caAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGACCTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGgcg                                                                                                                                  >  1:651455/1‑149 (MQ=255)
                     tCAGAGGCAAAATCATCTCTCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCACGAAt                                                                                                                             <  2:839898/149‑1 (MQ=255)
                       agagGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGc                                                                                                                           <  2:668017/149‑1 (MQ=255)
                        gagGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCg                                                                                                                          <  2:174782/149‑1 (MQ=255)
                         agGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACTGGTGAGGAACTCTCCTTGCGCCAGACGTATGGCGCTCATCAACAGCTTAAGCTGCACACGCGATAAGGTATCTTCCAGCGGCGCACCGTCGGCGCGAATGCGt                                                                                                                         <  2:706816/149‑1 (MQ=255)
                          ggCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTa                                                                                                                        >  2:1130745/1‑149 (MQ=255)
                           gCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTaa                                                                                                                       <  1:223610/149‑1 (MQ=255)
                           gCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTaa                                                                                                                       >  1:487280/1‑149 (MQ=255)
                              aaaTCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGAGAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTTAGTc                                                                                                                    >  2:476191/1‑149 (MQ=255)
                                atcatcTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGGGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCg                                                                                                                  <  1:1120757/149‑1 (MQ=255)
                                   atcTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATTAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCtt                                                                                                               >  2:1065708/1‑149 (MQ=255)
                                      tATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGGTTtgt                                                                                                            >  1:188476/1‑149 (MQ=255)
                                       aTCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTtgtg                                                                                                           >  1:603126/1‑149 (MQ=255)
                                       aTCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTtgtg                                                                                                           <  2:574166/149‑1 (MQ=255)
                                        tCAGGTAGAGACACCGCCGCCCGCTTTCACGAGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGc                                                                                                          >  1:158910/1‑149 (MQ=255)
                                          aGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCgg                                                                                                        >  2:333880/1‑149 (MQ=255)
                                            gTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGAGCGGGc                                                                                                      >  2:1005931/1‑149 (MQ=255)
                                                acacacCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCAAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACAGGCGCACCGTCGGCGCGAATGGGTAAGTACGCTTTGTGCGGGCCGTg                                                                                                  >  2:1086352/3‑149 (MQ=255)
                                                 gaCACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTgc                                                                                                 >  1:1027155/1‑149 (MQ=255)
                                                  acacCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTgcg                                                                                                >  2:251306/1‑149 (MQ=255)
                                                    ctctgactttctctttccagcgcggctgggagaaagagacagaatatgctgaggtgctggaacgtaattttgaacgcgatcgccagctaacctaCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGcgcg                                                                                              >  2:226339‑M1/95‑149 (MQ=255)
                                                    acCGCCGCCCGCTTTCGCGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCAGCCCACGCGATAAGGTATATTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGAGcgcg                                                                                              >  2:399757/1‑149 (MQ=255)
                                                    acCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCATCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGcgcg                                                                                              >  2:104785/1‑149 (MQ=255)
                                                    acCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGcgcg                                                                                              <  2:252422/149‑1 (MQ=255)
                                                     tctgactttctctttccagcgcggctgggagaaagagacagaatatgctgaggtgctggaacgtaattttgaacgcgatcgccagctaacctaCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCgg                                                                                             >  1:762192‑M1/94‑149 (MQ=255)
                                                       gccgccCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGgtg                                                                                           <  1:1086771/149‑1 (MQ=255)
                                                       gccgccCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGgtg                                                                                           >  1:298073/1‑149 (MQ=255)
                                                        ccgcccgcTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGAGGGCCGTGCGCGgtgt                                                                                          >  2:106174/1‑149 (MQ=255)
                                                             cgcTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGtt                                                                                     <  2:632555/149‑1 (MQ=255)
                                                               ccttCACGGGTTATGAACTCTCCTTGCGCCAGCCGTAAGGCCCACATCAACAGCGTAAGCTGCCCACGCGATAAGGTAGCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGGTAg                                                                                   <  2:1121965/147‑1 (MQ=255)
                                                               cTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAg                                                                                   >  1:932993/1‑149 (MQ=255)
                                                                tttCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCCCGCGATAAGGTATCTTCCACCGGCGCCCCGTCGGCGCGCATGCGTAAGTCCGCTTTGTGCGGGCCGGGCGCGGTGGAGGTTAGc                                                                                  >  1:377770/1‑149 (MQ=255)
                                                                 ttCACGGGTGAGGAACTCTCCTTGCGCCCGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCTCCGTCGGCGCGAATGCGTAAGTCCGCTATGTGCGGGCCGTGCGCGGTGTAGGTTAGCt                                                                                 <  1:19524/149‑1 (MQ=255)
                                                                 ttCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCt                                                                                 <  1:729488/149‑1 (MQ=255)
                                                                   cACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCAGATCAACAGCTTAAGCTGCCCACGCGATAAGGTCTCTTCCTCCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTgg                                                                               <  2:262504/149‑1 (MQ=255)
                                                                       ggTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGAt                                                                           <  2:373644/149‑1 (MQ=255)
                                                                           aGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTACGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGCTcgcg                                                                       >  2:825535/1‑149 (MQ=255)
                                                                             gAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGtt                                                                     >  1:719498/1‑149 (MQ=255)
                                                                             gAACTCTCCTTGCGCCAGACGGAAGGCGCACATCAACAGCTTCAGCTGCCCACGCGATAAGGTCTCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCGTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGtt                                                                     <  1:359857/149‑1 (MQ=255)
                                                                               aCTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCa                                                                   >  1:1002545/1‑149 (MQ=255)
                                                                                 tctcCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCaaa                                                                 >  1:997877/1‑149 (MQ=255)
                                                                                 tctcCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCaaa                                                                 >  2:1109288/1‑149 (MQ=255)
                                                                                  ctcCTTGCGCCAGACGTAAGGCGCACATCATGAGCTTAAGCTGCCCAAGCGATAAGGTATCTTCCAACGGCGAACCGTCGGCGCGAATGCGTATGTCCTCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCaaaa                                                                <  1:657903/149‑1 (MQ=255)
                                                                                   tcCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGGTGCCCACGCGATAAGGTATCTTCCACCGGAGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGTGCCGTGCGCGGTGTAGGTTAGGTTGAGATCGAGTTCAAAAt                                                               >  1:89325/1‑149 (MQ=255)
                                                                                     cTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTa                                                             <  2:120234/149‑1 (MQ=255)
                                                                                      ttGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGCTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTAc                                                            <  2:509909/149‑1 (MQ=255)
                                                                                         cgcCAGACGTAAGGCGCACATCAACAGCTTACGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGtt                                                         <  1:401705/149‑1 (MQ=255)
                                                                                          gcCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTc                                                        >  2:309871/1‑149 (MQ=255)
                                                                                            gaGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGGATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCTGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCa                                                      <  1:896560/148‑1 (MQ=255)
                                                                                            cAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTTCGTTCCa                                                      >  2:132883/1‑149 (MQ=255)
                                                                                            cAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCa                                                      <  1:267925/149‑1 (MQ=255)
                                                                                              gACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGc                                                    <  2:749943/149‑1 (MQ=255)
                                                                                                  tAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGAGCGCGTTCAAAATTACGTTCCAGCAccg                                                >  1:852879/1‑148 (MQ=255)
                                                                                                   aaGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCTGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTc                                               >  2:166053/1‑149 (MQ=255)
                                                                                                   aaGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTc                                               >  1:371523/1‑149 (MQ=255)
                                                                                                     ggCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAg                                             >  2:1157390/1‑149 (MQ=255)
                                                                                                      gcgcACATCAACAGCTTAAGCTGCCCACGCGATACGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGc                                            <  1:1098114/149‑1 (MQ=255)
                                                                                                        gcACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGATAGCTGGCCATCGCGATCAAAATTACGTTCCAGCACCTCAGCat                                          >  2:947603/1‑149 (MQ=255)
                                                                                                            aTCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTc                                      >  1:754141/1‑149 (MQ=255)
                                                                                                             tgggcAGCTTAAGCTGTCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCt                                     >  2:174853/5‑149 (MQ=255)
                                                                                                               aaCAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGt                                   <  2:287931/149‑1 (MQ=255)
                                                                                                               aaCAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGt                                   <  1:598076/149‑1 (MQ=255)
                                                                                                                aCAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGAACCTCAGCATATTCTGtc                                  >  2:744405/1‑149 (MQ=255)
                                                                                                                  aGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGtctc                                <  1:353204/149‑1 (MQ=255)
                                                                                                                  aGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGAGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGtctc                                >  2:1123190/1‑149 (MQ=255)
                                                                                                                    cTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCtt                              >  2:1143061/1‑149 (MQ=255)
                                                                                                                    cTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCtt                              >  2:1033176/1‑149 (MQ=255)
                                                                                                                     ttAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCttt                             >  1:407397/1‑149 (MQ=255)
                                                                                                                      tAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTtc                            <  1:725555/149‑1 (MQ=255)
                                                                                                                       aaGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCCTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTtct                           <  2:540864/149‑1 (MQ=255)
                                                                                                                        aGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTGTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTtctc                          >  2:554674/1‑149 (MQ=255)
                                                                                                                             cccACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGc                     >  1:938580/1‑149 (MQ=255)
                                                                                                                             cccACGCGATAAGGTATCTTACACAGGCGCAACGTCGGCGCGCCTGCCTAAGACCGCTTTGTGCGTGCCGTGCCGTGTGTAAGTTAGCTGGCGAGCGCGGTCAAAATAACGTTCCAGATCCTAAGCATATTCTGTATCTTTCTCCCatc                     >  2:792443/1‑147 (MQ=255)
                                                                                                                              ccACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGcc                    >  2:612750/1‑149 (MQ=255)
                                                                                                                               cACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCcg                   >  1:1151165/1‑149 (MQ=255)
                                                                                                                               cACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCcg                   <  1:174853/149‑1 (MQ=255)
                                                                                                                                  gcgATAAGGTATCTGCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCgcgc                <  2:1012944/149‑1 (MQ=255)
                                                                                                                                    gATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGTGCCGTGCGCGGTGTAGGTTAGATGGCGATAGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTg              >  2:758459/1‑149 (MQ=255)
                                                                                                                                       aaGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGaa           <  1:259369/149‑1 (MQ=255)
                                                                                                                                        aGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGaaa          <  2:200964/149‑1 (MQ=255)
                                                                                                                                          gTATCTTGAACCGTCGCTCAGTCGGCGCTAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGGTGTGTATGTTAGCTGGCGATCGCGTTGAAAATTACGTTCCAGCAACTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAaga        <  2:955546/149‑1 (MQ=255)
                                                                                                                                                tCCACCGGCGCACAGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTAGGTTCCATCACCTCAGCATATTGTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGt  <  1:744774/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CCGCGACGCTCATCATCAAGCTCAGAGGCAAAATCATCTATCAGGTAGAGACACCGCCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGT  >  NC_000913/3880281‑3880573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.