New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3880427 =166 (2.420)3 (0.050) 3/266 NT 1.9% coding (795/1074 nt) recF gap repair protein
?NC_000913 3880485 = 149 (2.260)coding (737/1074 nt) recF gap repair protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 175 total aligned reads displayed.

CCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGC  >  NC_000913/3880337‑3880633
                                                                                                                                                    |                                                                                                                                                    
ccgcccgcTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGAGGGCCGTGCGCGgtgt                                                                                                                                                      >  2:106174/1‑149 (MQ=255)
 cgcccgcTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTa                                                                                                                                                     <  2:376691/149‑1 (MQ=255)
    ccgcTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGt                                                                                                                                                  <  1:361415/149‑1 (MQ=255)
    ccgcTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACACCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGAAGGt                                                                                                                                                  >  1:955546/1‑149 (MQ=255)
     cgcTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGtt                                                                                                                                                 <  2:632555/149‑1 (MQ=255)
       ccttCACGGGTTATGAACTCTCCTTGCGCCAGCCGTAAGGCCCACATCAACAGCGTAAGCTGCCCACGCGATAAGGTAGCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGGTAg                                                                                                                                               <  2:1121965/147‑1 (MQ=255)
         ttCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCt                                                                                                                                             <  1:729488/149‑1 (MQ=255)
           cACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCAGATCAACAGCTTAAGCTGCCCACGCGATAAGGTCTCTTCCTCCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTgg                                                                                                                                           <  2:262504/149‑1 (MQ=255)
               ggTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGAt                                                                                                                                       <  1:752048/149‑1 (MQ=255)
               ggTGAGGAACTCTCCTTGCGCCAGACGGAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTAGCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGAt                                                                                                                                       <  2:421837/149‑1 (MQ=255)
                  taGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATcgc                                                                                                                                    <  2:232363/148‑1 (MQ=255)
                  gAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATcgc                                                                                                                                    >  2:854456/1‑149 (MQ=255)
                   aGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTACGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGCTcgcg                                                                                                                                   >  2:825535/1‑149 (MQ=255)
                     gAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGtt                                                                                                                                 <  2:1005533/149‑1 (MQ=255)
                       aCTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCa                                                                                                                               >  1:1002545/1‑149 (MQ=255)
                         tctcCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCaaa                                                                                                                             <  1:185797/149‑1 (MQ=255)
                         tctcCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCaaa                                                                                                                             >  1:997877/1‑149 (MQ=255)
                         tctcCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCaaa                                                                                                                             >  2:1109288/1‑149 (MQ=255)
                          ctcCTTGCGCCAGACGTAAGGCGCACATCATGAGCTTAAGCTGCCCAAGCGATAAGGTATCTTCCAACGGCGAACCGTCGGCGCGAATGCGTATGTCCTCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCaaaa                                                                                                                            <  1:657903/149‑1 (MQ=255)
                           tcCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGGTGCCCACGCGATAAGGTATCTTCCACCGGAGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGTGCCGTGCGCGGTGTAGGTTAGGTTGAGATCGAGTTCAAAAt                                                                                                                           >  1:89325/1‑149 (MQ=255)
                              ttGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGCTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTAc                                                                                                                        <  2:509909/149‑1 (MQ=255)
                                gcgcCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGt                                                                                                                      <  1:84548/149‑1 (MQ=255)
                                gcgcCAGACGTAAGGCGCACATCAACAGCTTAAGCGGCCCACGCGATAAGGTATCGTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGt                                                                                                                      <  2:725436/149‑1 (MQ=255)
                                  gcCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTc                                                                                                                    >  2:309871/1‑149 (MQ=255)
                                   ccATACGTAAGGCGCACATCAACAGCTTAAGGTGCCCACGCGATTAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGGGGGGCTTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTcc                                                                                                                   <  2:1017067/149‑1 (MQ=255)
                                    gaGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGGATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCTGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCa                                                                                                                  <  1:896560/148‑1 (MQ=255)
                                    cAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGCTCGCGTTCAAAATTACGTTCCa                                                                                                                  >  2:596863/1‑149 (MQ=255)
                                    cAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTTCGTTCCa                                                                                                                  >  2:132883/1‑149 (MQ=255)
                                      gACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGc                                                                                                                <  2:749943/149‑1 (MQ=255)
                                           aaGGCGCACATCAACCGCTTAAGCTGCCCACGAGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGATTGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTc                                                                                                           <  1:284527/149‑1 (MQ=255)
                                             ggCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAg                                                                                                         >  2:1157390/1‑149 (MQ=255)
                                             ggCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAg                                                                                                         >  2:468383/1‑149 (MQ=255)
                                              gcgcACATCAACAGCTTAAGCTGCCCACGCGATACGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGc                                                                                                        <  1:1098114/149‑1 (MQ=255)
                                                gcACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGATAGCTGGCCATCGCGATCAAAATTACGTTCCAGCACCTCAGCat                                                                                                      >  2:947603/1‑149 (MQ=255)
                                                     tgggcAGCTTAAGCTGTCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCt                                                                                                 >  2:174853/5‑149 (MQ=255)
                                                     tCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCt                                                                                                 <  1:1100092/149‑1 (MQ=255)
                                                       aaCAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGt                                                                                               <  1:598076/149‑1 (MQ=255)
                                                       aaCAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGt                                                                                               <  2:287931/149‑1 (MQ=255)
                                                        aCAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGCTCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGta                                                                                              >  2:508615/1‑148 (MQ=255)
                                                          aGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGtctc                                                                                            <  1:353204/149‑1 (MQ=255)
                                                            cTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCCAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCtt                                                                                          >  2:1139188/1‑149 (MQ=255)
                                                            cTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCACCACCTCAGCATATTCTGTCTCtt                                                                                          >  1:149085/1‑149 (MQ=255)
                                                            cTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTACCAGCACCTCAGCATAATCTGTCTCtt                                                                                          >  1:1030867/1‑149 (MQ=255)
                                                             ttAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCttt                                                                                         >  1:407397/1‑149 (MQ=255)
                                                              tAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTtc                                                                                        <  1:725555/149‑1 (MQ=255)
                                                                aGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTtctc                                                                                      >  1:115368/1‑149 (MQ=255)
                                                                aGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTGTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTtctc                                                                                      >  2:554674/1‑149 (MQ=255)
                                                                     cccACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGc                                                                                 >  1:938580/1‑149 (MQ=255)
                                                                     cccACGCGATAAGGTATCTTACACAGGCGCAACGTCGGCGCGCCTGCCTAAGACCGCTTTGTGCGTGCCGTGCCGTGTGTAAGTTAGCTGGCGAGCGCGGTCAAAATAACGTTCCAGATCCTAAGCATATTCTGTATCTTTCTCCCatc                                                                                 >  2:792443/1‑147 (MQ=255)
                                                                       cACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCcg                                                                               >  1:1151165/1‑149 (MQ=255)
                                                                          gcgATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCgcgc                                                                            >  1:266120/1‑149 (MQ=255)
                                                                          gcgATAAGGTATCTGCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCgcgc                                                                            <  2:1012944/149‑1 (MQ=255)
                                                                             aTAAGGTCTCTTCCACCGGCGCACCGTCGGCTCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTgg                                                                         <  1:654793/149‑1 (MQ=255)
                                                                               aaGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGaa                                                                       <  1:259369/149‑1 (MQ=255)
                                                                                  gTATCTTGAACCGTCGCTCAGTCGGCGCTAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGGTGTGTATGTTAGCTGGCGATCGCGTTGAAAATTACGTTCCAGCAACTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAaga                                                                    <  2:955546/149‑1 (MQ=255)
                                                                                    aTCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCAAGCCGCGCTGGAAAgcga                                                                  >  1:788354/1‑149 (MQ=255)
                                                                                      cTTCCACCGGCGCACCGACGGCGCGAATGCGTCAGTCCGCTTTGTGCTGGCCGTTCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTGCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGaaa                                                                <  2:803130/149‑1 (MQ=255)
                                                                                       ttCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCGGTGCGCGGTGTACGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCGCAGGAGATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAg                                                               >  2:1040662/1‑149 (MQ=255)
                                                                                            ccgcgcacggcccgcacaaagcggacttacgcattcgcgccgacggtgcgccggtgTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCaga                                                          >  1:762192‑M2/57‑149 (MQ=255)
                                                                                            CCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCTGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCaga                                                          >  2:309670‑M1/1‑149 (MQ=255)
                                                                                            CCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCaga                                                          <  2:581069‑M1/149‑1 (MQ=255)
                                                                                            CCGGCGCACCGTCGGCGCGAATGCGTAAGGCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCaga                                                          >  2:1147600‑M1/1‑149 (MQ=255)
                                                                                             cgcgcacggcccgcacaaagcggacttacgcattcgcgccgacggtgcgccggtgTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCagag                                                         >  2:226339‑M2/56‑149 (MQ=255)
                                                                                              gcgcacggcccgcacaaagcggacttacgcattcgcgccgacggtgcgccggtgTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAgaga                                                        <  2:762192‑M2/95‑1 (MQ=255)
                                                                                               gcgcACCGTCGGCGCGAATGCGTACGTCCGCTTTGTGCTGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTGATTATTACGTTACAGAACCTCAGGATATTCTGTCTCTTTCTCACAGAAGCGGTGTAAAGTGATAGTCAGAGaa                                                       >  1:673567/1‑149 (MQ=255)
                                                                                                 gcACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGaaaa                                                     <  1:309871/149‑1 (MQ=255)
                                                                                                      ggcGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAg                                                <  2:744651/147‑1 (MQ=255)
                                                                                                      ggcGGCGCGAATGCGGAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAg                                                <  2:1093306/147‑1 (MQ=255)
                                                                                                       tCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAGAACTCAgg                                               >  2:213294/1‑149 (MQ=255)
                                                                                                       tCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAgg                                               >  2:753351/1‑149 (MQ=255)
                                                                                                       tCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAgg                                               <  2:158910/149‑1 (MQ=255)
                                                                                                            gcgAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGaa                                          >  1:739948/1‑149 (MQ=255)
                                                                                                             cgAATGCCTAAGTCCGCTATCTGCGGGCCGAGCGCGGTGTAGGTAAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCCCCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGaaa                                         <  2:660212/149‑1 (MQ=255)
                                                                                                              gAATGCGTAAGTCCGCTTTGTGCGGGCCGGGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAAt                                        <  2:487280/149‑1 (MQ=255)
                                                                                                               aaTGCGTAAGGCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCGGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCTTATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAAtt                                       <  1:374787/149‑1 (MQ=255)
                                                                                                                 tGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGc                                     <  1:516646/149‑1 (MQ=255)
                                                                                                                   cGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCta                                   >  2:360764/1‑148 (MQ=255)
                                                                                                                      taGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGATAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCGCTTTCACCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACa                                <  1:62453/148‑1 (MQ=255)
                                                                                                                       aGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAg                               <  1:1065708/149‑1 (MQ=255)
                                                                                                                       aGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAg                               <  1:1123190/149‑1 (MQ=255)
                                                                                                                       aGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAg                               <  1:399757/149‑1 (MQ=255)
                                                                                                                        gTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAgg                              >  1:803854/1‑149 (MQ=255)
                                                                                                                           cGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTAt                           <  2:906622/149‑1 (MQ=255)
                                                                                                                           cGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCAGATTCGGTCTCGTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAACCCTCAGGGAGAAATTGCTTACAgggtt                           >  2:667015/1‑146 (MQ=255)
                                                                                                                            gCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATc                          >  2:435828/1‑149 (MQ=255)
                                                                                                                             cTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCa                         <  1:333880/149‑1 (MQ=255)
                                                                                                                             cTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCa                         >  2:383015/1‑149 (MQ=255)
                                                                                                                               ttGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGc                       <  1:480267/149‑1 (MQ=255)
                                                                                                                                tgtgCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATTTTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGcc                      <  2:611993/149‑1 (MQ=255)
                                                                                                                                tgtgCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGcc                      >  2:89678/1‑149 (MQ=255)
                                                                                                                                 gtgCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCTGCCa                     >  1:1089396/1‑149 (MQ=255)
                                                                                                                                     gggCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATc                 >  2:166561/1‑149 (MQ=255)
                                                                                                                                        ccGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGAATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGc              >  2:690518/1‑149 (MQ=255)
                                                                                                                                           tGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGGAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCcgc           >  1:411401/1‑149 (MQ=255)
                                                                                                                                           tGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCcgc           <  1:854456/149‑1 (MQ=255)
                                                                                                                                           tGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCcgc           <  1:950802/149‑1 (MQ=255)
                                                                                                                                           tGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCcgc           <  1:1138708/149‑1 (MQ=255)
                                                                                                                                                  tgTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCg    >  1:386083‑M2/3‑149 (MQ=255)
                                                                                                                                                  tgTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCg    <  2:188476‑M2/147‑1 (MQ=255)
                                                                                                                                                    tAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGgc  >  1:90983/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCGCCCGCTTTCACGGGTGAGGAACTCTCCTTGCGCCAGACGTAAGGCGCACATCAACAGCTTAAGCTGCCCACGCGATAAGGTATCTTCCACCGGCGCACCGTCGGCGCGAATGCGTAAGTCCGCTTTGTGCGGGCCGTGCGCGGTGTAGGTTAGCTGGCGATCGCGTTCAAAATTACGTTCCAGCACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGC  >  NC_000913/3880337‑3880633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.