mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583130 | 123 (0.870) | 5 (0.040) | 3/272 | NT | 3.6% | intergenic (‑82/+119) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583231 | 147 (1.060) | intergenic (‑183/+18) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | 4227543 = | 155 (1.090) | 3 (0.020) | 3/264 | NT | 2.0% | intergenic (+32/‑188) | metH/yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter |
| ? | NC_000913 | 4227568 = | 144 (1.070) | intergenic (+57/‑163) | metH/yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter | |||||
| * | ? | NC_000913 | = 3785831 | 214 (1.510) | 5 (0.040) | 3/260 | NT | 2.5% | coding (572/1545 nt) | gpmM | phosphoglycero mutase III, cofactor‑independent |
| ? | NC_000913 | = 3785851 | 185 (1.400) | coding (592/1545 nt) | gpmM | phosphoglycero mutase III, cofactor‑independent | |||||
| * | ? | NC_000913 | 3577783 = | 185 (1.310) | 3 (0.020) | 3/270 | NT | 1.8% | coding (944/996 nt) | gntR | d‑gluconate inducible gluconate regulon transcriptional repressor |
| ? | NC_000913 | 3577889 = | 150 (1.090) | coding (838/996 nt) | gntR | d‑gluconate inducible gluconate regulon transcriptional repressor | |||||
| * | ? | NC_000913 | 3355148 = | 150 (1.060) | 4 (0.030) | 3/272 | NT | 2.8% | coding (424/4461 nt) | gltB | glutamate synthase, large subunit |
| ? | NC_000913 | 3355176 = | 135 (0.970) | coding (452/4461 nt) | gltB | glutamate synthase, large subunit | |||||
| * | ? | NC_000913 | = 2904164 | 237 (1.670) | 6 (0.050) | 4/216 | NT | 3.1% | intergenic (+790/+583) | ygcE/queE | putative kinase/7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis |
| ? | NC_000913 | 2904287 = | 186 (1.690) | intergenic (+913/+460) | ygcE/queE | putative kinase/7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis | |||||
| * | ? | NC_000913 | 983123 = | 110 (0.780) | 3 (0.020) | 3/266 | NT | 2.9% | coding (49/549 nt) | ycbK | M15A protease‑related family periplasmic protein |
| ? | NC_000913 | 983167 = | 97 (0.720) | coding (93/549 nt) | ycbK | M15A protease‑related family periplasmic protein | |||||
| * | ? | NC_000913 | = 297211 | 128 (0.900) | 5 (0.040) | 3/264 | NT | 3.9% | pseudogene (6/49 nt) | ptwF | tRNA‑OTHER |
| ? | NC_000913 | = 297214 | 125 (0.930) | pseudogene (9/49 nt) | ptwF | tRNA‑OTHER | |||||
| * | ? | NC_000913 | 105361 = | 116 (0.820) | 3 (0.020) | 3/254 | NT | 2.8% | coding (57/1152 nt) | ftsZ | GTP‑binding tubulin‑like cell division protein |
| ? | NC_000913 | = 105357 | 106 (0.820) | coding (53/1152 nt) | ftsZ | GTP‑binding tubulin‑like cell division protein | |||||