mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4373296 = | 39 (0.650) | 58 (0.970) | 3/236 | NT | 60.0% | intergenic (+134/+69) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein |
| ? | NC_000913 | 4374498 = | NA (NA) | noncoding (1/99 nt) | RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
| * | ? | NC_000913 | = 3592563 | 69 (1.330) | 3 (0.060) | 3/194 | NT | 4.4% | intergenic (‑238/+161) | ugpB/livF | sn‑glycerol‑3‑phosphate ABC transporter periplasmic binding protein/branched‑chain amino acid ABC transporter ATPase |
| ? | NC_000913 | = 3598495 | NA (NA) | noncoding (99/99 nt) | RIP259 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP259 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 5 (0.080) | 3/254 | NT | 3.4% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 916878 | 142 (2.180) | coding (406/1659 nt) | ybjD | putative OLD family ATP‑dependent endonuclease; DUF2813 family protein | |||||