| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4579877 | 96 (1.060) | 5 (0.060) | 5/262 | NT | 4.9% | noncoding (43/77 nt) | symR | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA |
| ? | NC_000913 | = 4579907 | 103 (1.190) | noncoding (73/77 nt) | symR | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4579726‑4579877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagcgCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGTTAT < NC_000913/4579907‑4579760 CGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTA > 2:537783/1‑149CGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTA < 1:722709/149‑1 GAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCG > 1:1249237/1‑149 AATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGC > 2:1530481/1‑149 CGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTA‑‑GCGATGCGGATGTGCGCCAACACACCCGCAT < 2:749378/149‑1 ccTAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGGTGTGCAATAGAATGCGTGTGAGTCATAACTGCTATTCTCCAGGTATAGTGATTGTGATTA‑‑GCGGTGCGGATGTGCGCCAACACACCCGCATCG < 2:979278/147‑1 ACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATC < 1:1530481/149‑1 CGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCA < 1:808637/149‑1 TGACTTGACGGTTATTTGCTGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGTTTGTGATTAGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAA < 2:754479/149‑1 TTAGCGCGGTGCGGATGTGCGCCAACACGCCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCG < 2:1558867/149‑1 TTAGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCA > 2:1171430/1‑138 TTAGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCA < 1:1171430/138‑1 TAGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGG > 1:367347/1‑149 TAGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGG > 2:863420/1‑149 AGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACCCGCAGTCTATTGCACAGCCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGT > 1:223498/1‑149 AGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCTCAACCGTTCGAAGAAGAAGTCTCCCCGGCAAATCACCGTCATGTCAGCGTCGGT > 1:610543/1‑149 AGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGT < 2:1511983/149‑1 AGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGT > 2:298305/1‑149 AGCGCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGAATGACTCGCATTCTATTGCACAACCGATCGAATCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGT < 2:92711/149‑1 GCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGTTAT < 1:937407/149‑1 GCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGTTAT > 1:145871/1‑149 CGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4579726‑4579877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagcgCGGTGCGGATGTGCGCCAACACACCCGCATCGCTAATCACAATCACTATTCCTGGAGAATAGCAGTTATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGTTAT < NC_000913/4579907‑4579760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |