| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4594863 = | 106 (1.170) | 4 (0.050) | 4/262 | NT | 3.7% | intergenic (‑141/+74) | lgoT/lgoR | putative L‑galactonate:H+ symporter/putative transcriptional activator for L‑galactonate catabolism |
| ? | NC_000913 | 4594911 = | 107 (1.240) | intergenic (‑189/+26) | lgoT/lgoR | putative L‑galactonate:H+ symporter/putative transcriptional activator for L‑galactonate catabolism | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCGCTCCGTAACCATTTGAATTCAGCTAAACAATCAATGATTCGATCCATTAATGAGAACACGCGTTATGCTCATTAAGTACGGATTAAAAACAGCAAACTATTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4595015‑4594863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTGAGAA > NC_000913/4594911‑4595058 TGCGCTCCGTAACCATTTGAATTCAGCTAAACAATCAATGATTCGATCCATTAATGAGAACACGCGTTATGCTCATTAAGTACGGATTAAAAACAGCAAACTATTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCC < 2:582527/149‑1 GCGCTCCGTAACCATTTGAATTCAGCTAAACAATCAATGATTCGATCCATTAATGAGAACACGCGTTATGCTCATTAAGTACGGATTAAAAACAGCAAACTATTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCCC < 1:853657/149‑1 CGCTCCGTAACCATTTGAATTCAGCTAAACAATCAATGATTCGATCCATTAATGAGAACACGCGTTATGCTCATTAAGTACGGATTAAAAACAGCAAGCTATTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCCCG < 2:1329100/149‑1 AAAAACAGCAAACTATTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCCCGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAA > 2:582351/1‑149 CAAACTATTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTACCGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGAATAACGCGTGTTCTCATTAATGGATCGATTCATTGATTGTTTAGCTGAATTCAAATG > 1:68815/1‑149 TTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCCCGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAA > 1:364528/1‑134 TTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCCCGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAA < 2:364528/134‑1 caGCTAATAGTTTGCTGTTTTTAATCCGTACTTATTGAGCATACCGCGTGTGCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGT‑GCATCAAGGTCACCGCGGCAAATCAGAGCGCTGA < 2:99434/147‑1 CCGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTG > 1:1256188/1‑149 CCGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTG > 1:39770/1‑149 CGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTATTGGATGGAATCTTTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCTTGGGTGGCTTCAAGGTCTCTGAGGCAAATCAGAGCGCTGg > 2:789534/1‑148 CGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTGA < 2:1429629/149‑1 CGCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTGA < 2:539888/149‑1 GCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTGAG > 2:72945/1‑149 GCTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTGAG > 2:953093/1‑149 CTAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCTCAAGGGTGGCAACAAGGTCACTGCGGCAAATCAGAGCGCTGAGA > 1:348961/1‑149 TAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTGAGAA < 2:338804/149‑1 TGCGCTCCGTAACCATTTGAATTCAGCTAAACAATCAATGATTCGATCCATTAATGAGAACACGCGTTATGCTCATTAAGTACGGATTAAAAACAGCAAACTATTAGCGGGTGCACGGTTTTATCAAAAGATAAATACCGGGAAATTCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4595015‑4594863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctAATAGTTTGCTGTTTTTAATCCGTACTTAATGAGCATAACGCGTGTTCTCATTAATGGATCGAATCATTGATTGTTTAGCTGAATTCAAATGGTTACGGAGCGCAAGGGTGGCATCAAGGTCACTGCGGCAAATCAGAGCGCTGAGAA > NC_000913/4594911‑4595058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |