mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 152 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4638146 | 788 (0.880) | 9 (0.010) | 7/250 | NT | 1.2% | intergenic (+26/‑32) | creC/creD | sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein |
| ? | NC_000913 | = 4638170 | 761 (0.920) | intergenic (+50/‑8) | creC/creD | sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein | |||||
| * | ? | NC_000913 | 4602159 = | 741 (0.830) | 6 (0.010) | 5/258 | NT | 0.87% | coding (700/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | 4602186 = | 667 (0.780) | coding (673/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | = 4596517 | 917 (1.020) | 4 (0.000) | 4/266 | NT | 0.44% | coding (528/1023 nt) | lgoD | L‑galactonate oxidoreductase; L‑gulonate oxidoreductase |
| ? | NC_000913 | = 4596550 | 921 (1.050) | coding (561/1023 nt) | lgoD | L‑galactonate oxidoreductase; L‑gulonate oxidoreductase | |||||
| * | ? | NC_000913 | = 4551007 | 889 (0.990) | 4 (0.000) | 4/256 | NT | 0.47% | coding (290/1344 nt) | gntP | fructuronate transporter |
| ? | NC_000913 | = 4551030 | 856 (1.010) | coding (267/1344 nt) | gntP | fructuronate transporter | |||||
| * | ? | NC_000913 | = 4534139 | 848 (0.950) | 11 (0.010) | 6/252 | NT | 1.3% | intergenic (‑86/+291) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment |
| ? | NC_000913 | = 4534160 | 851 (1.020) | intergenic (‑107/+270) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment | |||||
| * | ? | NC_000913 | 4514043 = | 1016 (1.130) | 4 (0.000) | 3/264 | NT | 0.39% | coding (266/903 nt) | fecB | ferric citrate ABC transporter periplasmic binding protein |
| ? | NC_000913 | 4514089 = | 1036 (1.190) | coding (220/903 nt) | fecB | ferric citrate ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 4513364 | 931 (1.040) | 4 (0.000) | 4/258 | NT | 0.44% | coding (46/999 nt) | fecC | ferric citrate ABC transporter permease |
| ? | NC_000913 | = 4513381 | 921 (1.080) | coding (29/999 nt) | fecC | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | 4513316 = | 980 (1.090) | 3 (0.000) | 3/264 | NT | 0.32% | coding (94/999 nt) | fecC | ferric citrate ABC transporter permease |
| ? | NC_000913 | 4513344 = | 892 (1.030) | coding (66/999 nt) | fecC | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | 4512518 = | 1110 (1.240) | 7 (0.010) | 7/258 | NT | 0.69% | coding (892/999 nt) | fecC | ferric citrate ABC transporter permease |
| ? | NC_000913 | 4512564 = | 968 (1.140) | coding (846/999 nt) | fecC | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | = 4509084 | 859 (0.960) | 3 (0.000) | 3/262 | NT | 0.34% | noncoding (78/795 nt) | IS911 | repeat region |
| ? | NC_000913 | = 4509180 | 913 (1.060) | noncoding (174/795 nt) | IS911 | repeat region | |||||