mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 78 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4639801 = | 390 (1.000) | 3 (0.010) | 3/264 | NT | 0.79% | coding (506/717 nt) | arcA | response regulator in two‑component regulatory system with ArcB or CpxA |
| ? | NC_000913 | 4639844 = | 382 (1.020) | coding (463/717 nt) | arcA | response regulator in two‑component regulatory system with ArcB or CpxA | |||||
| * | ? | NC_000913 | 4614759 = | 501 (1.280) | 10 (0.030) | 7/268 | NT | 2.0% | coding (785/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | 4614791 = | 470 (1.240) | coding (753/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| * | ? | NC_000913 | = 4583137 | 353 (0.900) | 16 (0.040) | 10/264 | NT | 4.4% | intergenic (‑89/+112) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583224 | 364 (0.970) | intergenic (‑176/+25) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4530007 | 397 (1.010) | 3 (0.010) | 3/266 | NT | 0.75% | coding (237/1314 nt) | sgcC | putative PTS system EIIC permease component |
| ? | NC_000913 | = 4530034 | 410 (1.090) | coding (210/1314 nt) | sgcC | putative PTS system EIIC permease component | |||||
| * | ? | NC_000913 | 4412102 = | 325 (0.830) | 3 (0.010) | 3/264 | NT | 0.96% | coding (124/399 nt) | yjfL | UPF0719 family inner membrane protein |
| ? | NC_000913 | 4412146 = | 310 (0.830) | coding (168/399 nt) | yjfL | UPF0719 family inner membrane protein | |||||
| * | ? | NC_000913 | 4381790 = | 402 (1.030) | 3 (0.010) | 3/260 | NT | 0.80% | coding (529/1809 nt) | frdA | anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit |
| ? | NC_000913 | 4381822 = | 363 (0.980) | coding (497/1809 nt) | frdA | anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit | |||||
| * | ? | NC_000913 | 4363384 = | 395 (1.010) | 3 (0.010) | 3/260 | NT | 0.84% | coding (1659/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC |
| ? | NC_000913 | 4363422 = | 339 (0.920) | coding (1621/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC | |||||
| * | ? | NC_000913 | = 4341795 | 356 (0.910) | 4 (0.010) | 4/240 | NT | 1.2% | intergenic (‑167/‑116) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding |
| ? | NC_000913 | = 4341815 | 353 (1.040) | intergenic (‑187/‑96) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding | |||||
| * | ? | NC_000913 | = 4327898 | 530 (1.350) | 3 (0.010) | 3/264 | NT | 0.59% | coding (764/2229 nt) | crfC | clamp‑binding sister replication fork colocalization protein, dynamin‑related |
| ? | NC_000913 | = 4327927 | 507 (1.350) | coding (793/2229 nt) | crfC | clamp‑binding sister replication fork colocalization protein, dynamin‑related | |||||
| * | ? | NC_000913 | 4302340 = | 363 (0.930) | 3 (0.010) | 3/266 | NT | 0.88% | coding (739/2052 nt) | mdtO | membrane translocase (MDR) of MdtNOP efflux pump, PET family |
| ? | NC_000913 | 4302402 = | 329 (0.870) | coding (677/2052 nt) | mdtO | membrane translocase (MDR) of MdtNOP efflux pump, PET family | |||||