| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 799594 = | 135 (0.830) | 7 (0.050) | 4/260 | NT | 5.5% | intergenic (+13/+28) | pgl/ybhD | 6‑phosphogluconolactonase/putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | 799618 = | 113 (0.740) | intergenic (+37/+4) | pgl/ybhD | 6‑phosphogluconolactonase/putative DNA‑binding transcriptional regulator | |||||
CGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/799745‑799594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgccggTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATT > NC_000913/799618‑799766 CGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCC > 1:971216/1‑150CGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCC > 1:2012337/1‑150 GTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCG < 2:887554/150‑1 GTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCG > 1:2635978/1‑150 TACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCTGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGG < 1:1351145/150‑1 TACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGG < 1:1770273/150‑1 TACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGG < 1:1770192/150‑1 TACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGG < 1:468531/150‑1 TACTTTCTACAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGG < 1:296681/150‑1 AGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCA > 2:1717296/1‑150 AGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGGGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGGCAGTCCATAAATTAATCAGCc > 2:1717448/1‑149 AGGAGATAGGTTAATAAACCGGCGCAGGAGAGACTGCGCCGGTGTATTAACCTAACTCCTGTAACGCGTGTCACTGGCGTTCGACGATATTGGTCCACAAAATGTCTTTATCGTACGTCCATAAATTAATAAGCAACGCAAAAAAGCGgt > 1:2608580/1‑148 ACCGGCGCAGGAGAGACTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGT > 1:2202082/1‑150 ACCGGCGCAGGAGAGACTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGT > 1:2420914/1‑150 ACCGGCGCAGGAGAGACTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGT > 1:1545347/1‑150 CGGCGCAGGAGAGACTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTAC > 2:1976552/1‑150 tcncCTGCGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTA > 1:1345073/5‑150 CGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAA < 2:1069499/150‑1 CGCCGGTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAA < 2:1691064/150‑1 GTGTATTATCCTATCTCCTGTAACGGGTGTCTCTGGCGTTCGACGATATTGGTCCACAATTTGTCTTTATCGTCAGTCGATATATTAATCAGCAAGGCAAATAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGTATTATT > 2:1668772/1‑150 CGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAATACACCGGCGCAGGAGAGACTGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/799745‑799594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgccggTGTATTAACCTATCTCCTGTAACGCGTGTCTCTGGCGTTCGACGATATTGGTCCACAAATTGTCTTTATCGTCAGTCCATAAATTAATCAGCAAGGCAAAAAAGCGTTCTGCTGCTGGAGAAAGTACGGCATCTTTACGGCGAATTATT > NC_000913/799618‑799766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |