mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 75 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4627283 = | 89 (1.130) | 3 (0.040) | 3/266 | NT | 3.6% | coding (1372/1383 nt) | radA | DNA repair protein |
| ? | NC_000913 | 4627323 = | 76 (1.010) | coding (9/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
| * | ? | NC_000913 | 4618040 = | 71 (0.900) | 3 (0.040) | 3/262 | NT | 4.3% | coding (718/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4618096 = | NA (NA) | coding (774/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | 4614858 = | 87 (1.100) | 3 (0.040) | 3/268 | NT | 3.5% | coding (686/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | 4614895 = | 84 (1.100) | coding (649/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| * | ? | NC_000913 | 4601423 = | 58 (0.740) | 3 (0.040) | 3/270 | NT | 5.0% | coding (95/540 nt) | dnaT | DNA biosynthesis protein (primosomal protein I) |
| ? | NC_000913 | 4601460 = | 58 (0.760) | coding (58/540 nt) | dnaT | DNA biosynthesis protein (primosomal protein I) | |||||
| * | ? | NC_000913 | 4579879 = | 68 (0.860) | 3 (0.040) | 3/268 | NT | 4.3% | noncoding (45/77 nt) | symR | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA |
| ? | NC_000913 | 4579905 = | 67 (0.880) | noncoding (71/77 nt) | symR | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA | |||||
| * | ? | NC_000913 | 4562615 = | 93 (1.180) | 3 (0.040) | 3/262 | NT | 3.4% | coding (61/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter |
| ? | NC_000913 | 4562662 = | 85 (1.140) | coding (14/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter | |||||
| * | ? | NC_000913 | = 4553761 | 64 (0.810) | 3 (0.040) | 3/262 | NT | 4.5% | coding (861/1461 nt) | uxuB | D‑mannonate oxidoreductase, NAD‑dependent |
| ? | NC_000913 | = 4553784 | 66 (0.890) | coding (884/1461 nt) | uxuB | D‑mannonate oxidoreductase, NAD‑dependent | |||||
| * | ? | NC_000913 | 4542682 = | 125 (1.580) | 3 (0.040) | 3/260 | NT | 2.6% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 110 (1.490) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4530604 | 88 (1.120) | 3 (0.040) | 3/266 | NT | 3.4% | coding (1048/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| ? | NC_000913 | = 4530644 | 88 (1.170) | coding (1008/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain | |||||
| * | ? | NC_000913 | = 4522456 | 83 (1.050) | 3 (0.040) | 3/278 | NT | 3.7% | coding (1639/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | = 4522501 | 73 (0.930) | coding (1594/1968 nt) | yjhG | putative dehydratase | |||||