| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3242999 = | 49 (0.870) | 5 (0.090) | 5/248 | NT | 9.5% | coding (316/1488 nt) | uxaA | D‑altronate dehydratase |
| ? | NC_000913 | 3243024 = | 49 (0.930) | coding (291/1488 nt) | uxaA | D‑altronate dehydratase | |||||
TCAAATATGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCTATCAACCTGATTTTCAGGATCTGCCTGCGCAAGCGGCAGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3243148‑3242999‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagatcCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTGGC > NC_000913/3243024‑3243158 TCAAATATGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAACACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCGATCAACCTGACTTTCAGCATCTGCCTGCGCAAGCG > 2:333435/1‑143 AAATATGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCTATCAACCTGATTTTCAGGATCTGCCTGCGCAAGCGGC > 1:941166/1‑143 ATGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCTATCAACCTGATTTTCAGGATCTGCCTGCGCAAGCGGCAGAT < 1:637088/143‑1 TGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCTATCAACCTGATTTTCAGGATCTGCCTGCGCAAGCGGCAGATC < 1:931190/143‑1 GCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTAGATCAGTATCGCTATCAAGATGATTTTCAGGAGCTGCGTGCACAAGCGGCAGgacgt > 2:441502/1‑138 TGATTTTCAGGATCTGCCTGCGCAAGCGGCAGATCGTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAAT > 1:304763/1‑143 TTCAGGATCTGCCTGCGCAAGCGGCAGATCGTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCCATCGGCA > 2:858809/1‑143 CTGCCTGCGCAAGCGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTC < 1:1083460/62‑1 CTGCCTGCGCAAGCGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTC > 2:1083460/1‑62 GCGCAAGCGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGCATGGTGGGCGTGACCGTGAACACCTGCCGCAATGTCAGCCACTGCCTAACCAATCGGCACCCCATAgcggctc > 2:245011/1‑136 tGGCAGATCCGGGAGAGCGCGTTGGTGGCGATACTGATGCAGAGCGCTCAGATGCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTGG < 2:283780/142‑1 GGCAGATCGTGAAAATCAGTTTGATAGCGATACTGATCCATATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTGGC < 2:256485/143‑1 TCAAATATGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCTATCAACCTGATTTTCAGGATCTGCCTGCGCAAGCGGCAGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3243148‑3242999‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagatcCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTGGC > NC_000913/3243024‑3243158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |