New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3242999 =	49 (0.870)	5 (0.090)	5/248	NT	9.5%	coding (316/1488 nt)	uxaA	D‑altronate dehydratase
	?	NC_000913	3243024 =	49 (0.930)					coding (291/1488 nt)	uxaA	D‑altronate dehydratase

CGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCA  >  NC_000913/3242861‑3243141                                                                                                                                           |                                                                                                                                               cGGCGTTGTTGGGCGCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCt                                                                                                                                            <  2:692547/143‑1 (MQ=255)    gccaatgtcatcaaatatggcctgccgattggttatgcattggcggatattgcggcaggtgttcacgttcacgcccacaatacgcgcacgaatctgagcgatatggatcagtatcgctatcaaactgattttcacGATCTGcc                                                                                                                                         <  2:256485‑M1/8‑1 (MQ=255)     ccaatgtcatcaaatatggcctgccgattggttatgcattggcggatattgcggcaggtgttcacgttcacgcccacaatacgcgcacgcatctgagcgctctgcatcagtatcgccaccaacgcgctctcccgGATCTgcca                                                                                                                                        <  2:283780‑M1/9‑2 (MQ=255)      ttggtgGTCTCTCTCAGAAAACTGTTCTGGATCGGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACATCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGc                                                                                                                                       <  2:567087/143‑1 (MQ=255)            gagccgctatggggtgccgattggttaggcagtggctgacattgcggcaggtgttcacggtcacgcccaccatgcgcgcacgaatctgagcgatctggatcagtatcgctatcaacctgattttcagGATCTGCCGCTTgcgc                                                                                                                                 >  2:245011‑M1/128‑143 (MQ=255)              ccctTTCAGAAATCGCTTCTGGATTCGCCGGGCGATGCCGTTGACACAGCCCACGGTTGGCACGATCCACAGCTCATTGCGTACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCgcag                                                                                                                               <  2:664674/141‑1 (MQ=255)               tctTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCgcagg                                                                                                                              <  2:911737/143‑1 (MQ=255)                 tttCAGAAAACGGTTCTGGATCTGCCGCGGGCTACCTCTGACACAGCCCACGGTTGGCAGGATCCACAGCCCATTACGCACCCCGACATCGCCGTTCGCGCGACGATAGATCTGCCCTTCACGACCTGCCGCTTGCgcaggcc                                                                                                                            >  2:342351/1‑142 (MQ=255)                  ttCAGAAATCGGTTCTTGATCCGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCgcaggcag                                                                                                                           <  2:267503/143‑1 (MQ=255)                   tCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGa                                                                                                                          <  1:425397/143‑1 (MQ=255)                          tgccgatgggttatgcattggcggatattgcggcaggtgttcacgttcacgcccacaatacgcgcacgaatctgagcgatctggatcagtatcgctatcaacctgattttcacGATCTGCCGCTTGCGCAGGCAGATCCTGaa                                                                                                                   >  2:858809‑M1/114‑143 (MQ=255)                              ttCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGCTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCGTGCGCAGGCAGATCCTGAAAATc                                                                                                               >  2:94218/1‑143 (MQ=255)                               tCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTCCGCACGCAGATCCTGAAACTCa                                                                                                              >  1:147235/1‑143 (MQ=255)                               attggttatgcattggcggatattgcggcaggtgttcacgttcacgcccacaatacgcgcacgaatctgagcgatctggatcagtatcgctatcaacctgattttcacGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCa                                                                                                              >  1:304763‑M1/109‑143 (MQ=255)                                cTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAg                                                                                                             <  1:1064029/143‑1 (MQ=255)                                  ggATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGACAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCAGCTCGCGCAGGCAGCTCCTGAAAATCAGGt                                                                                                           >  2:645041/1‑143 (MQ=255)                                    aTCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGGAAATCAGGTTg                                                                                                         >  1:651520/1‑143 (MQ=255)                                       tcccacgcgATTCTGTTGTCACGGCCCACGGTTGGCAGGATCCCCCGCTTTTTACTCACCCCGTCTACGCAGTTGGCGCCACCCGAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATa                                                                                                      <  2:589736/138‑1 (MQ=255)                                       tGCCGCTCGATGCCGGTTCCACAGCCCACGGTTGGCAGGATCCACAGCTCATTCCGCACCCCGACATCGCCGTCAGCGCGACGATAGATCTGCACTTCACGCTCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATa                                                                                                      <  1:1027799/143‑1 (MQ=255)                                       ggCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATa                                                                                                      <  2:535869/142‑1 (MQ=255)                                        gCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCCCGATACGGCGGCTGCGCAGGCAGATCCCGAAAATCAGGTTgctga                                                                                                     >  2:779108/1‑139 (MQ=255)                                         ccGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGCTCCACAGCTCATTACGCACCCCGCCATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCACGCCGCTCCTGAACATCAGGTTGATCGc                                                                                                    >  2:134538/1‑143 (MQ=255)                                            cgcgATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAACCAGGTTGATAGCggt                                                                                                 >  1:379383/1‑141 (MQ=255)                                              cgATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATAc                                                                                               >  1:670248/1‑143 (MQ=255)                                                    cGTTGACACAGCCCACTGTTGGCATGATCCACAGCTCATTACGCCCCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGAGCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATcc                                                                                         <  2:794419/143‑1 (MQ=255)                                                       tGACGCAGCCTACGGTGGGCAGGATCCACAGCTCATTACGCACGCCGACATCGCCGTGAGCGCGACGATAGATCTGTACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGa                                                                                      <  2:97776/143‑1 (MQ=255)                                                       tGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGCCGAGAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGa                                                                                      <  2:600956/143‑1 (MQ=255)                                                        ggcataGCACACGTTTTGCAGGATCCACAGCTCATTACGCATCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCATGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGAt                                                                                     <  2:390773/138‑1 (MQ=255)                                                            caGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCt                                                                                 <  1:365137/143‑1 (MQ=255)                                                             aGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTc                                                                                >  2:828336/1‑143 (MQ=255)                                                               cccACGGTTGGCAGGATCCACAGCCCATTACGCACCCCGACATCGCAGTTAGCGCGACGATAGATCTGCACTTCACGATCCGCCCCTTGCGCACGCAGAACAGCCACCTCAGGTTGATAGCGACACTGATGCACAtagacaag                                                                              >  2:488953/1‑136 (MQ=255)                                                                ccACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCAAGATCTGCCGCTTGCGCAGGCAGACCCCGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGa                                                                             >  1:302966/1‑143 (MQ=255)                                                                        ggCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCCGATTCGTgcg                                                                     >  1:835066/1‑143 (MQ=255)                                                                              aTCCACAGCTCATTACGCACCCCGACATCGCCGGTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTAtt                                                               <  1:218510/143‑1 (MQ=255)                                                                               tCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGCTCCAGCTCGCTCAGATTCGTGCGCGTATtg                                                              >  1:829777/1‑143 (MQ=255)                                                                               tCCACAGCTCATTACGCACCCCGACATCACCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCAGCTTGCGCAGGCAGATCCTGAAAAACAGGGTGATAGCGATACCGATCCAGATCGCTCAAATTCGTGCGACTATtg                                                              >  2:998295/1‑143 (MQ=255)                                                                                  acaGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTgg                                                           >  1:274516/1‑143 (MQ=255)                                                                                   caGCTCATTACGCACCCCGCCATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTggg                                                          <  1:965278/143‑1 (MQ=255)                                                                                    aGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTTGGc                                                         >  1:936530/1‑143 (MQ=255)                                                                                      cTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgt                                                       >  1:326446/1‑143 (MQ=255)                                                                                        cATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGCTTCGTGCGCCTATTGTGGGcgtgc                                                     >  2:559534/1‑142 (MQ=255)                                                                                         aTTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGGTCCTGAAAATCAGGGTGATAGCGATACTGGTCGAGATCGCTCAGATTCGTGAGCGTATTGTGGGcgagaa                                                    >  1:194636/1‑143 (MQ=255)                                                                                               cgcgccGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgtgaacgtgaa                                              <  2:1002027/139‑1 (MQ=255)                                                                                                   gagcgatctggatcagtatcgctatcaacctgattttcagGATCTGCCGCTTGCgcaggcag                                                                                                                           <  1:1083460‑M1/22‑1 (MQ=255)                                                                                                   gagcgatctggatcagtatcgctatcaacctgattttcagGATCTGCCGCTTGCgcaggcag                                                                                                                           >  2:1083460‑M1/41‑62 (MQ=255)                                                                                                    cGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCt                                         >  2:142721/1‑143 (MQ=255)                                                                                                        aTCGCCGTTAGCGCGACGATCGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCACATCCTGAAAATCAGGTTGACAGCGATACTCAGCCAGATCGCTCAGCTTAGTGCGCGCCTTGTCGCCGGGAAAGTGCACACACGCCg                                     >  2:245362/1‑143 (MQ=255)                                                                                                        aTCGCCGTGAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCg                                     <  1:623830/143‑1 (MQ=255)                                                                                                            ccGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAat                                 <  2:274516/143‑1 (MQ=255)                                                                                                             cGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGACACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAata                                <  2:992344/143‑1 (MQ=255)                                                                                                                  gcgcGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGc                           >  2:371387/1‑143 (MQ=255)                                                                                                                    gcgACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTACTGTGGGCGTGAACGTGAACACCAGCCGCAATATCCGACa                         >  2:827297/1‑143 (MQ=255)                                                                                                                      gacgaTAGATCTGCACTTCACGAGCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAAt                       <  1:343618/143‑1 (MQ=255)                                                                                                                             gATCTGCACTGCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAAc                <  1:475732/143‑1 (MQ=255)                                                                                                                                 tGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTAGGCGTGACCGTGAACACCTGCCGCAATATCCGCCACTGCATAACCAAt            >  1:375978/1‑143 (MQ=255)                                                                                                                                  gCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATc           >  1:12323/1‑143 (MQ=255)                                                                                                                                    aCTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCgg         <  1:828336/143‑1 (MQ=255)                                                                                                                                      ttCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCa       >  1:302490/1‑143 (MQ=255)                                                                                                                                      ttCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCa       <  1:818189/143‑1 (MQ=255)                                                                                                                                      ttCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCCATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAACATCCGCCAAGGCATAACCAATCgccc       >  2:822044/1‑140 (MQ=255)                                                                                                                                           GATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCa  <  1:931190‑M1/143‑1 (MQ=255)                                                                                                                                           |                                                                                                                                               CGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCA  >  NC_000913/3242861‑3243141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.