New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3242999 = | 49 (0.870) | 5 (0.090) | 5/248 | NT | 9.5% | coding (316/1488 nt) | uxaA | D‑altronate dehydratase |
? | NC_000913 | 3243024 = | 49 (0.930) | coding (291/1488 nt) | uxaA | D‑altronate dehydratase |
ACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTGGCCCC > NC_000913/3242886‑3243161 | tgccgatgggttatgcattggcggatattgcggcaggtgttcacgttcacgcccacaatacgcgcacgaatctgagcgatctggatcagtatcgctatcaacctgattttcacGATCTGCCGCTTGCGCAGGCAGATCCTGaa > 2:858809‑M1/114‑143 (MQ=255) ttCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGCTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCGTGCGCAGGCAGATCCTGAAAATc > 2:94218/1‑143 (MQ=255) tCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTCCGCACGCAGATCCTGAAACTCa > 1:147235/1‑143 (MQ=255) attggttatgcattggcggatattgcggcaggtgttcacgttcacgcccacaatacgcgcacgaatctgagcgatctggatcagtatcgctatcaacctgattttcacGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCa > 1:304763‑M1/109‑143 (MQ=255) cTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAg < 1:1064029/143‑1 (MQ=255) ggATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGACAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCAGCTCGCGCAGGCAGCTCCTGAAAATCAGGt > 2:645041/1‑143 (MQ=255) aTCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGGAAATCAGGTTg > 1:651520/1‑143 (MQ=255) tcccacgcgATTCTGTTGTCACGGCCCACGGTTGGCAGGATCCCCCGCTTTTTACTCACCCCGTCTACGCAGTTGGCGCCACCCGAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATa < 2:589736/138‑1 (MQ=255) tGCCGCTCGATGCCGGTTCCACAGCCCACGGTTGGCAGGATCCACAGCTCATTCCGCACCCCGACATCGCCGTCAGCGCGACGATAGATCTGCACTTCACGCTCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATa < 1:1027799/143‑1 (MQ=255) ggCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATa < 2:535869/142‑1 (MQ=255) gCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCCCGATACGGCGGCTGCGCAGGCAGATCCCGAAAATCAGGTTgctga > 2:779108/1‑139 (MQ=255) ccGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGCTCCACAGCTCATTACGCACCCCGCCATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCACGCCGCTCCTGAACATCAGGTTGATCGc > 2:134538/1‑143 (MQ=255) cgcgATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAACCAGGTTGATAGCggt > 1:379383/1‑141 (MQ=255) cgATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATAc > 1:670248/1‑143 (MQ=255) cGTTGACACAGCCCACTGTTGGCATGATCCACAGCTCATTACGCCCCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGAGCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATcc < 2:794419/143‑1 (MQ=255) tGACGCAGCCTACGGTGGGCAGGATCCACAGCTCATTACGCACGCCGACATCGCCGTGAGCGCGACGATAGATCTGTACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGa < 2:97776/143‑1 (MQ=255) tGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGCCGAGAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGa < 2:600956/143‑1 (MQ=255) ggcataGCACACGTTTTGCAGGATCCACAGCTCATTACGCATCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCATGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGAt < 2:390773/138‑1 (MQ=255) caGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCt < 1:365137/143‑1 (MQ=255) aGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTc > 2:828336/1‑143 (MQ=255) cccACGGTTGGCAGGATCCACAGCCCATTACGCACCCCGACATCGCAGTTAGCGCGACGATAGATCTGCACTTCACGATCCGCCCCTTGCGCACGCAGAACAGCCACCTCAGGTTGATAGCGACACTGATGCACAtagacaag > 2:488953/1‑136 (MQ=255) ccACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCAAGATCTGCCGCTTGCGCAGGCAGACCCCGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGa > 1:302966/1‑143 (MQ=255) ggCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCCGATTCGTgcg > 1:835066/1‑143 (MQ=255) aTCCACAGCTCATTACGCACCCCGACATCGCCGGTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTAtt < 1:218510/143‑1 (MQ=255) tCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGCTCCAGCTCGCTCAGATTCGTGCGCGTATtg > 1:829777/1‑143 (MQ=255) tCCACAGCTCATTACGCACCCCGACATCACCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCAGCTTGCGCAGGCAGATCCTGAAAAACAGGGTGATAGCGATACCGATCCAGATCGCTCAAATTCGTGCGACTATtg > 2:998295/1‑143 (MQ=255) acaGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTgg > 1:274516/1‑143 (MQ=255) caGCTCATTACGCACCCCGCCATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTggg < 1:965278/143‑1 (MQ=255) aGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTTGGc > 1:936530/1‑143 (MQ=255) cTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgt > 1:326446/1‑143 (MQ=255) cATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGCTTCGTGCGCCTATTGTGGGcgtgc > 2:559534/1‑142 (MQ=255) aTTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGGTCCTGAAAATCAGGGTGATAGCGATACTGGTCGAGATCGCTCAGATTCGTGAGCGTATTGTGGGcgagaa > 1:194636/1‑143 (MQ=255) cgcgccGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgtgaacgtgaa < 2:1002027/139‑1 (MQ=255) cGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCt > 2:142721/1‑143 (MQ=255) aTCGCCGTTAGCGCGACGATCGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCACATCCTGAAAATCAGGTTGACAGCGATACTCAGCCAGATCGCTCAGCTTAGTGCGCGCCTTGTCGCCGGGAAAGTGCACACACGCCg > 2:245362/1‑143 (MQ=255) aTCGCCGTGAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCg < 1:623830/143‑1 (MQ=255) ccGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAat < 2:274516/143‑1 (MQ=255) cGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGACACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAata < 2:992344/143‑1 (MQ=255) gcgcGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGc > 2:371387/1‑143 (MQ=255) gcgACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTACTGTGGGCGTGAACGTGAACACCAGCCGCAATATCCGACa > 2:827297/1‑143 (MQ=255) gacgaTAGATCTGCACTTCACGAGCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAAt < 1:343618/143‑1 (MQ=255) gATCTGCACTGCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAAc < 1:475732/143‑1 (MQ=255) tgattttcaggatctgcctgcgcaagcggcagatcGTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAAt > 1:304763‑M2/36‑143 (MQ=255) tGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTAGGCGTGACCGTGAACACCTGCCGCAATATCCGCCACTGCATAACCAAt > 1:375978/1‑143 (MQ=255) gCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATc > 1:12323/1‑143 (MQ=255) aCTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCgg < 1:828336/143‑1 (MQ=255) ttcaggatctgcctgcgcaagcggcagatcGTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCCATCGGCa > 2:858809‑M2/31‑143 (MQ=255) ttCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCa > 1:302490/1‑143 (MQ=255) ttCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCa < 1:818189/143‑1 (MQ=255) ttCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCCATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAACATCCGCCAAGGCATAACCAATCgccc > 2:822044/1‑140 (MQ=255) acgtcCTGCCGCTTGTGCACGCAGCTCCTGAAAATCATCTTGATAGCGATACTGATCTAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGc > 2:441502‑M1/6‑143 (MQ=255) GATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCa < 1:931190‑M1/143‑1 (MQ=255) ATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCat < 1:637088‑M1/143‑1 (MQ=255) ctgcctgcgcaagcggcagatcCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTc < 1:1083460‑M2/40‑1 (MQ=255) ctgcctgcgcaagcggcagatcCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTc > 2:1083460‑M2/23‑62 (MQ=255) GCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATAttt > 1:941166‑M1/1‑143 (MQ=255) CGCTTGCGCAGGCAGATGCTGAAAGTCAGGTTGATCGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTGTTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGa > 2:333435‑M1/1‑143 (MQ=255) gCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTtgat > 1:136833/1‑143 (MQ=255) gCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTtgat < 1:342351/143‑1 (MQ=255) gcgcaagcggcagatcCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGCATGGTGGGCGTGACCGTGAACACCTGCCGCAATGTCAGCCACTGCCTAACCAATCGgcaccccatagcggctc > 2:245011‑M2/17‑136 (MQ=255) cTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCTGTATCCGCCAATGCATAACCAATCGGCAGGCCATATTtgatg < 2:670248/143‑1 (MQ=255) ggaggcagATACTGAAAATCCGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGACGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACAtt < 2:164955/141‑1 (MQ=255) gcaggcagATCCTGAAAATCAAGTAGATAGCGATACTGATCCAGATCGCTCAGATTCGTACGCGTATTGTAGGCGTGAACGTGAACTCCTGCCGCAATATCCGCCAATGCATAACCAATCCGCAGACCATACTTGATGACAtt > 2:744021/1‑143 (MQ=255) tggcagatcCGGGAGAGCGCGTTGGTGGCGATACTGATGCAGAGCGCTCAGATGCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTgg < 2:283780‑M2/134‑1 (MQ=255) ggcagatcGTGAAAATCAGTTTGATAGCGATACTGATCCATATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTGGc < 2:256485‑M2/135‑1 (MQ=255) agATCCTGAAAATCAAGTTGATAGCGATACTGATCCAGATCGCGCAGATTCGGGCGCGTATTGTAGACGTGATCGTGAACACCTGCCGCAATATCCGCCAATGCATGACAAATCGGGAAGCAATGCTTGATGACAttagacgc > 2:668077/1‑137 (MQ=255) | ACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAGGCCATATTTGATGACATTGGCCCC > NC_000913/3242886‑3243161 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |