New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	311347 =	56 (0.990)	3 (0.060)	3/248	NT	5.2%	intergenic (‑11/‑765)	ecpR/ykgL	DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL
	?	NC_000913	311366 =	56 (1.060)					intergenic (‑30/‑746)	ecpR/ykgL	DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL

ACAATCAGTTCAGATAGTCCTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATG  >  NC_000913/311206‑311487                                                                                                                                              |                                                                                                                                             ccgttcacatattgacactcatcgggaaaaaaaacataaatttaagcccaatcgaaaataattaaacttaatctcgtttaacctttattgatatgtactacgtatcttatttacttccggtttactaaggaaactgactgcAc                                                                                                                                             >  2:918114‑M1/142‑143 (MQ=255) ccgttcacatattgacactcatcgggaaaaaaaacataaatttaagcccaatcgaaaataattaaacttaatctcgtttaacctttattgatatgtactacgtatcttatttacttccggtttactaaggaaactgaatgcAc                                                                                                                                             >  2:532158‑M1/142‑143 (MQ=255) acaATCAGTTCAGATAGTCCTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAAc                                                                                                                                             >  1:305226/1‑143 (MQ=255)   gtctacatattgacactcatcgggaaaaaaaacataaatttaagcccaatcgaaaataattaaacttaatctcgtttaacctttattgatatgtactacgtatcttatttacttccggtttactaaggaaactgaatgcACCt                                                                                                                                           >  2:983954‑M1/140‑143 (MQ=255)    ttcacatattgacactcatcgggaaaaaaaacataaatttaagcccaatcgaaaataattaaacttaatctcgtttatactattgttttatgtactacgtagcttatttacttccggtttactaaggaaactgaatgcACCTg                                                                                                                                          <  1:411383‑M1/5‑1 (MQ=255)         atattgacactcatcgggaaaaaaaacataaatttaagcccaatcgaaaataattaaacttaatctcgtttaacctttattgatatatactacttatcttatttacttccggtttactaagtaaactgaatgcACCTGTAata                                                                                                                                     <  2:126744‑M1/10‑2 (MQ=255)                  tCCTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGt                                                                                                                            <  1:380433/143‑1 (MQ=255)                  tCCTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGATTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTCCTTTCCAAACTCGTAATTTTTACAGGt                                                                                                                            >  2:316432/1‑143 (MQ=255)                    cTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGc                                                                                                                          >  1:549466/1‑143 (MQ=255)                          agagggaGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAg                                                                                                                    <  2:764679/137‑1 (MQ=255)                            aaGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGtt                                                                                                                  >  2:157025/1‑143 (MQ=255)                            aaGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGtt                                                                                                                  >  1:880068/1‑143 (MQ=255)                              gTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGATGCATTCAGTTTc                                                                                                                >  2:152206/1‑143 (MQ=255)                               tAGGCGTCATCGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTcc                                                                                                               <  2:346226/143‑1 (MQ=255)                                aGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCt                                                                                                              <  1:309700/143‑1 (MQ=255)                                 ggCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCtt                                                                                                             <  1:701863/143‑1 (MQ=255)                                  gCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCttc                                                                                                            >  1:459354/1‑142 (MQ=255)                                       aTGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTaaa                                                                                                       >  1:660052/1‑143 (MQ=255)                                         ggggAGACCAGGTGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAAcc                                                                                                     <  2:221469/143‑1 (MQ=255)                                            gagaCCAGGTGTTTTTATCAGAACGGTTTTGACATTCCATATGGTTGTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGa                                                                                                  <  2:355917/143‑1 (MQ=255)                                            gagaCCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGa                                                                                                  <  1:621920/143‑1 (MQ=255)                                            gagaCCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGa                                                                                                  <  1:927012/143‑1 (MQ=255)                                             agaCCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGaa                                                                                                 <  1:108025/143‑1 (MQ=255)                                                 cAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTaa                                                                                             >  1:32775/1‑143 (MQ=255)                                                 cAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTGTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGATGTaa                                                                                             >  2:188605/1‑143 (MQ=255)                                                  aGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTGGTCAACTGGAAGTaaa                                                                                            >  1:405922/1‑143 (MQ=255)                                                    aTGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATa                                                                                          >  2:920629/1‑143 (MQ=255)                                                     tGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATaa                                                                                         <  1:593312/143‑1 (MQ=255)                                                             attaaacttaatctcgtttaacctttattgatatgtactacgtatcttatttacttccggtttactaaggaaactgaatgcACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACgta                                                                                 >  1:495357‑M1/82‑143 (MQ=255)                                                               aGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACgtagt                                                                               >  1:1021362/1‑143 (MQ=255)                                                               aGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCATTAGTAAACCGGAAGTAAACAAGATACctagc                                                                               >  2:581573/1‑142 (MQ=255)                                                                gAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCACACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACgtagta                                                                              <  1:416993/143‑1 (MQ=255)                                                                 aaCGGTTTTGACATTCCATATTGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTAc                                                                             <  2:166076/143‑1 (MQ=255)                                                                 aaCGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTAc                                                                             >  1:343740/1‑143 (MQ=255)                                                                     gTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTAGTGTAAACACTTTGCCTTGTCACTACTTTCCAAACCTGTAATTTTTACAGGAGCATCCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACatat                                                                         <  1:152206/143‑1 (MQ=255)                                                                       tttGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTACACCGGAAGTAAATAAGATACGTAGTACATATCa                                                                       >  1:1018668/1‑143 (MQ=255)                                                                             aTTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGCAAATAAGATAAGTAGGCCATACCAATAAAg                                                                 >  2:657633/1‑143 (MQ=255)                                                                              ttCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGACGTAAATAAGATACGTAGTACATATCAATAAAgg                                                                >  2:637783/1‑143 (MQ=255)                                                                                 cATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTa                                                             >  1:943024/1‑143 (MQ=255)                                                                                    atGGTTTTTATCCTCATAGTCCCTACTGTAATCGCTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAAc                                                          <  2:697201/143‑1 (MQ=255)                                                                                       gTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATCAAGGTTACACgct                                                       >  2:62087/1‑141 (MQ=255)                                                                                          tttAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGAtt                                                    >  2:801798/1‑143 (MQ=255)                                                                                             aaCCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAACTAAGTTACGTAGTACATATCAATATATGTAAAACGAGATTAAg                                                 >  1:99260/1‑143 (MQ=255)                                                                                              aCCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAACCTGCACTTAAATAACACGCGTAGTACATATCAATACAGGGTAAAGGAGATTAAGt                                                >  2:178970/1‑143 (MQ=255)                                                                                               ccTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTCGTACATCTCAATAAAGGTTAAACGAGATTAAGtt                                               >  1:1045331/1‑143 (MQ=255)                                                                                                cTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGttt                                              >  2:787207/1‑143 (MQ=255)                                                                                                  cATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACAGATCAATAAAGGTTAAACGAGATTCAGCTTaa                                            >  1:918659/1‑143 (MQ=255)                                                                                                   aTAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAat                                           <  1:133031/143‑1 (MQ=255)                                                                                                         ccTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTGGTACATCTCAATAAAGGTCAAACGAGCTTAAGTCTAATGAtttt                                     >  2:6755/1‑143 (MQ=255)                                                                                                         ccTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATACAGGTTAAACGAGATTAAGTTTAATTAtttt                                     >  2:643808/1‑143 (MQ=255)                                                                                                         ccTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTAtttt                                     >  2:769008/1‑143 (MQ=255)                                                                                                           tACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGTAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCg                                   >  1:596918/1‑143 (MQ=255)                                                                                                           tACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTACg                                   >  2:810078/1‑143 (MQ=255)                                                                                                                 aaTCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTggg                             >  2:832050/1‑143 (MQ=255)                                                                                                                  aTCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATACAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGc                            >  2:51917/1‑143 (MQ=255)                                                                                                                  aTCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGc                            >  1:809811/1‑143 (MQ=255)                                                                                                                       tttGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATGGGACTTaaa                       >  2:422797/1‑143 (MQ=255)                                                                                                                           ccATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTa                   <  2:164063/143‑1 (MQ=255)                                                                                                                            cATGTCACTACTTTCCAAACCTGTAATTTTGACAGGTGCATTCAGTTTCCTTAGTAAACCGAAAGGAAATAATATACGTAGTACATATCAATAAAGGTTAAACGAGATCAAGTTTAATTATTTTCGATTGGGCTTAAATTTAt                  <  2:128305/143‑1 (MQ=255)                                                                                                                              taaggaaactgaatgcACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTa                                                                                                            >  1:304450‑M1/17‑51 (MQ=255)                                                                                                                              taaggaaactgaatgcACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTa                                                                                                            <  2:304450‑M1/35‑1 (MQ=255)                                                                                                                                 cACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGtttt             <  1:706117/143‑1 (MQ=255)                                                                                                                                  actactTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGttttt            <  2:337257/143‑1 (MQ=255)                                                                                                                                    tactTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTCGTAAACCGGAAGTAAAAAAGTTGCTTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGttttttt          <  1:152087/143‑1 (MQ=255)                                                                                                                                       tttCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTcc       >  2:95702/1‑143 (MQ=255)                                                                                                                                          ccAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTAAATAACATAAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGa    <  1:157025/143‑1 (MQ=255)                                                                                                                                            aaaCCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATg  >  1:1093822/1‑143 (MQ=255)                                                                                                                                            aaaCCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGATAAAATTTATGTTTTTTTTCCCGATg  >  2:435033/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                             ACAATCAGTTCAGATAGTCCTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATG  >  NC_000913/311206‑311487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.