New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 311347 =56 (0.990)3 (0.060) 3/248 NT 5.2% intergenic (‑11/‑765) ecpR/ykgL DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL
?NC_000913 311366 = 56 (1.060)intergenic (‑30/‑746) ecpR/ykgL DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL

CTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGAACGGAA  >  NC_000913/311225‑311508
                                                                                                                                             |                                                                                                                                              
cTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGc                                                                                                                                               >  1:549466/1‑143 (MQ=255)
      agagggaGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAg                                                                                                                                         <  2:764679/137‑1 (MQ=255)
        aaGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGtt                                                                                                                                       >  1:880068/1‑143 (MQ=255)
        aaGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGtt                                                                                                                                       >  2:157025/1‑143 (MQ=255)
          gTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGATGCATTCAGTTTc                                                                                                                                     >  2:152206/1‑143 (MQ=255)
           tAGGCGTCATCGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTcc                                                                                                                                    <  2:346226/143‑1 (MQ=255)
            aGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCt                                                                                                                                   <  1:309700/143‑1 (MQ=255)
             ggCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCtt                                                                                                                                  <  1:701863/143‑1 (MQ=255)
              gCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCttc                                                                                                                                 >  1:459354/1‑142 (MQ=255)
                   aTGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTaaa                                                                                                                            >  1:660052/1‑143 (MQ=255)
                     ggggAGACCAGGTGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAAcc                                                                                                                          <  2:221469/143‑1 (MQ=255)
                        gagaCCAGGTGTTTTTATCAGAACGGTTTTGACATTCCATATGGTTGTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGa                                                                                                                       <  2:355917/143‑1 (MQ=255)
                        gagaCCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGa                                                                                                                       <  1:927012/143‑1 (MQ=255)
                        gagaCCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGa                                                                                                                       <  1:621920/143‑1 (MQ=255)
                         agaCCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGaa                                                                                                                      <  1:108025/143‑1 (MQ=255)
                             cAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTaa                                                                                                                  >  1:32775/1‑143 (MQ=255)
                             cAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTGTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGATGTaa                                                                                                                  >  2:188605/1‑143 (MQ=255)
                              aGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTGGTCAACTGGAAGTaaa                                                                                                                 >  1:405922/1‑143 (MQ=255)
                                aTGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATa                                                                                                               >  2:920629/1‑143 (MQ=255)
                                 tGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATaa                                                                                                              <  1:593312/143‑1 (MQ=255)
                                         attaaacttaatctcgtttaacctttattgatatgtactacgtatcttatttacttccggtttactaaggaaactgaatgcACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACgta                                                                                                      >  1:495357‑M1/82‑143 (MQ=255)
                                           aGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACgtagt                                                                                                    >  1:1021362/1‑143 (MQ=255)
                                           aGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCATTAGTAAACCGGAAGTAAACAAGATACctagc                                                                                                    >  2:581573/1‑142 (MQ=255)
                                            gAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCACACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACgtagta                                                                                                   <  1:416993/143‑1 (MQ=255)
                                             aaCGGTTTTGACATTCCATATTGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTAc                                                                                                  <  2:166076/143‑1 (MQ=255)
                                             aaCGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTAc                                                                                                  >  1:343740/1‑143 (MQ=255)
                                                 gTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTAGTGTAAACACTTTGCCTTGTCACTACTTTCCAAACCTGTAATTTTTACAGGAGCATCCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACatat                                                                                              <  1:152206/143‑1 (MQ=255)
                                                   tttGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTACACCGGAAGTAAATAAGATACGTAGTACATATCa                                                                                            >  1:1018668/1‑143 (MQ=255)
                                                         aTTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGCAAATAAGATAAGTAGGCCATACCAATAAAg                                                                                      >  2:657633/1‑143 (MQ=255)
                                                          ttCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGACGTAAATAAGATACGTAGTACATATCAATAAAgg                                                                                     >  2:637783/1‑143 (MQ=255)
                                                             cATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTa                                                                                  >  1:943024/1‑143 (MQ=255)
                                                                atGGTTTTTATCCTCATAGTCCCTACTGTAATCGCTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAAc                                                                               <  2:697201/143‑1 (MQ=255)
                                                                   gTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATCAAGGTTACACgct                                                                            >  2:62087/1‑141 (MQ=255)
                                                                      tttAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGAtt                                                                         >  2:801798/1‑143 (MQ=255)
                                                                         aaCCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAACTAAGTTACGTAGTACATATCAATATATGTAAAACGAGATTAAg                                                                      >  1:99260/1‑143 (MQ=255)
                                                                          aCCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAACCTGCACTTAAATAACACGCGTAGTACATATCAATACAGGGTAAAGGAGATTAAGt                                                                     >  2:178970/1‑143 (MQ=255)
                                                                           ccTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTCGTACATCTCAATAAAGGTTAAACGAGATTAAGtt                                                                    >  1:1045331/1‑143 (MQ=255)
                                                                            cTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGttt                                                                   >  2:787207/1‑143 (MQ=255)
                                                                              cATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACAGATCAATAAAGGTTAAACGAGATTCAGCTTaa                                                                 >  1:918659/1‑143 (MQ=255)
                                                                               tacgtatcttatttacttccggtttactaaggaaactgaatgcacctgtaaaaattacaggtGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAat                                                                >  1:495357‑M2/63‑143 (MQ=255)
                                                                               aTAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAat                                                                <  1:133031/143‑1 (MQ=255)
                                                                                     ccTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTGGTACATCTCAATAAAGGTCAAACGAGCTTAAGTCTAATGAtttt                                                          >  2:6755/1‑143 (MQ=255)
                                                                                     ccTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATACAGGTTAAACGAGATTAAGTTTAATTAtttt                                                          >  2:643808/1‑143 (MQ=255)
                                                                                     ccTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTAtttt                                                          >  2:769008/1‑143 (MQ=255)
                                                                                       tACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGTAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCg                                                        >  1:596918/1‑143 (MQ=255)
                                                                                       tACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTACg                                                        >  2:810078/1‑143 (MQ=255)
                                                                                             aaTCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTggg                                                  >  2:832050/1‑143 (MQ=255)
                                                                                              aTCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATACAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGc                                                 >  2:51917/1‑143 (MQ=255)
                                                                                              aTCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGc                                                 >  1:809811/1‑143 (MQ=255)
                                                                                                   tttGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATGGGACTTaaa                                            >  2:422797/1‑143 (MQ=255)
                                                                                                       ccATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTa                                        <  2:164063/143‑1 (MQ=255)
                                                                                                        cATGTCACTACTTTCCAAACCTGTAATTTTGACAGGTGCATTCAGTTTCCTTAGTAAACCGAAAGGAAATAATATACGTAGTACATATCAATAAAGGTTAAACGAGATCAAGTTTAATTATTTTCGATTGGGCTTAAATTTAt                                       <  2:128305/143‑1 (MQ=255)
                                                                                                          taaggaaactgaatgcacctgtaaaaattacaggtGCATTCAGTTTCCTTa                                                                                                                                 <  2:304450‑M2/16‑1 (MQ=255)
                                                                                                          taaggaaactgaatgcacctgtaaaaattacaggtGCATTCAGTTTCCTTa                                                                                                                                 >  1:304450‑M2/36‑51 (MQ=255)
                                                                                                          taaggaaactgaatgcACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTa                                                                                                                                 <  2:304450‑M1/35‑1 (MQ=255)
                                                                                                          taaggaaactgaatgcACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTa                                                                                                                                 >  1:304450‑M1/17‑51 (MQ=255)
                                                                                                             cACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGtttt                                  <  1:706117/143‑1 (MQ=255)
                                                                                                              actactTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGttttt                                 <  2:337257/143‑1 (MQ=255)
                                                                                                                tactTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTCGTAAACCGGAAGTAAAAAAGTTGCTTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGttttttt                               <  1:152087/143‑1 (MQ=255)
                                                                                                                   tttCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTcc                            >  2:95702/1‑143 (MQ=255)
                                                                                                                      ccAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTAAATAACATAAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGa                         <  1:157025/143‑1 (MQ=255)
                                                                                                                        aaaCCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATg                       >  1:1093822/1‑143 (MQ=255)
                                                                                                                        aaaCCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGATAAAATTTATGTTTTTTTTCCCGATg                       >  2:435033/1‑143 (MQ=255)
                                                                                                                              GTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTc                 >  1:787207‑M1/1‑143 (MQ=255)
                                                                                                                                AATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCAATGAGTGTCaa               <  1:423680‑M1/143‑1 (MQ=255)
                                                                                                                                 ATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAAt              >  1:46896‑M1/1‑143 (MQ=255)
                                                                                                                                 ATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAAt              <  2:113809‑M1/143‑1 (MQ=255)
                                                                                                                                 ATTTTTACAGGTGCATTCAGTTTACTCAATATGCGTGATGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAAt              >  1:460362‑M1/1‑143 (MQ=255)
                                                                                                                                   ttttACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAatat            <  1:526456/143‑1 (MQ=255)
                                                                                                                                   tattacaggtGCATTCAGTTTACTTAGTAAACCGGAAGTAAATAAGATAAGTAGTATATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAatat            <  2:126744‑M2/133‑1 (MQ=255)
                                                                                                                                        caggtGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGCTACGTAGTACATAAAACAATAGTATAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGaa       <  1:411383‑M2/138‑1 (MQ=255)
                                                                                                                                         aggtGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCaatatgtagac      >  2:983954‑M2/5‑139 (MQ=255)
                                                                                                                                           gtGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGAACgg    >  2:532158‑M2/3‑143 (MQ=255)
                                                                                                                                           gtGCAGTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGAACgg    >  2:918114‑M2/3‑143 (MQ=255)
                                                                                                                                             gCATTCAGTTTCCTTAGTAAACGGGAAGTAAATAAGATAAGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGAACGGaa  <  2:459354/143‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
CTTTATAGAAGTAGGCGTCATGGGGAGACCAGATGTATTTATCAGAACGGTTTTGACATTCCATATGGTTTTTAACCTCATAGTCCCTACTGTAATCACTTTGCCATGTCACTACTTTCCAAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGAACGGAA  >  NC_000913/311225‑311508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.