| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4412327 = | 226 (2.000) | 18 (0.170) | 13/262 | NT | 7.7% | coding (349/399 nt) | yjfL | conserved inner membrane protein YjfL |
| ? | NC_000913 | 4412348 = | 213 (1.970) | coding (370/399 nt) | yjfL | conserved inner membrane protein YjfL | |||||
GGCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4412480‑4412327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCA > NC_000913/4412348‑4412494 GGCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGG > 1:1756225/1‑150 GCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTATTCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGC < 2:823572/150‑1 GCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGTTTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGC < 1:80952/150‑1 GCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGC < 2:825508/150‑1 GCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGC < 2:1393276/150‑1 GCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGC > 1:1893163/1‑150 CACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCG < 1:658700/150‑1 CACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCG > 1:1563500/1‑150 CACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCG < 1:1842709/150‑1 ACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGG < 2:462567/150‑1 ACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGG < 1:1981876/150‑1 ACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGG < 2:1574257/125‑1 ACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGG > 1:1574257/1‑125 ACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCG < 2:137281/121‑1 ACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCG > 1:137281/1‑121 CCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGG < 1:423185/103‑1 CCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGG > 2:423185/1‑103 GTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAAT > 2:103802/1‑150 CATGTCATACAAGCTGCGTTAAAAATACCGCCCGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTG > 1:932487/1‑150 ACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCG > 2:1123456/1‑150 CGTTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAATAAATAACAGTAAAATTGGTCACGAAGCGATTAGTTGCATTCTTAGACCAAATAATCa > 2:861213/1‑149 CGTTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCC > 2:894949/1‑150 GTTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGCCCGAATAATCCT > 1:1160536/1‑150 GTTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCT > 1:1899117/1‑150 TAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTT > 1:355685/1‑150 TAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTT > 1:99757/1‑150 AAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTT > 1:504377/1‑150 AAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTT > 1:1080433/1‑150 AAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGC > 1:1583056/1‑81 AAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGC < 2:1583056/81‑1 AAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTG < 1:1123456/150‑1 AAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTG > 1:1572106/1‑150 AAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTA < 2:686553/119‑1 AAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTA > 1:686553/1‑119 TACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACC > 1:491242/1‑150 GCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCG < 2:1572106/150‑1 GGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTAC > 2:1709025/1‑150 CGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGC < 2:99757/150‑1 GGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCA > 1:173550/1‑150 GGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCA < 2:884863/150‑1 GGCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4412480‑4412327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCA > NC_000913/4412348‑4412494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |