New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1463445	78 (1.760)	5 (0.120)	4/250	NT	6.1%	intergenic (+7/‑94)	paaK/paaX	phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX
	?	NC_000913	= 1463482	79 (1.880)					intergenic (+44/‑57)	paaK/paaX	phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX

CACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCC  >  NC_000913/1463304‑1463585                                                                                                                                              |                                                                                                                                             caccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGt                                                                                                                                             <  1:706593/143‑1 (MQ=255)   ccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGGCGTATCGTCt                                                                                                                                           >  2:482943/1‑143 (MQ=255)     ggCTGCGCGATGGCATTGAGGGGATGGTGGGGATGTGGACTGATGTGATGGGCGTTGAGTGTGGGTGTGTCCCGCGTGCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTgg                                                                                                                                         <  2:499380/142‑1 (MQ=255)       cTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGcc                                                                                                                                       >  1:760076/1‑143 (MQ=255)             cATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGATGCCTGCCGTATCGGCTGGCTCtgttg                                                                                                                                 >  1:386753/1‑143 (MQ=255)              aTCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCtggtgg                                                                                                                                >  1:655743/1‑143 (MQ=255)               tCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTggg                                                                                                                               >  1:463839/1‑143 (MQ=255)                    ttAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTaaa                                                                                                                          >  1:526081/1‑143 (MQ=255)                        gTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAgcgc                                                                                                                      >  1:182533/1‑143 (MQ=255)                         tCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGGCGTATCGTCTGGCCCTGGTGGGGTAAAgcgca                                                                                                                     >  2:407551/1‑142 (MQ=255)                          gggtgggggGGCTCTGGACGGAGGTGATGATCGTTAGCTGGGGCAGTTTCCGGCGTTCAGGAGGCAAGGCGCGGCGGGTGGTTGATCTGCGCGGCATTGGTGGTGCCGGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCa                                                                                                                    <  2:189443/140‑1 (MQ=255)                          cGATGGTGGGGACCTCTACCGATGTGATTATCGTTAACTGTGGCAGTAGCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGAGCTGCGCAATATTTTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCa                                                                                                                    <  1:265367/143‑1 (MQ=255)                           gATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAACCGCCAg                                                                                                                   >  2:378826/1‑143 (MQ=255)                            aggggggggATCTCTACCGATGTGGTGGTCGCTAGCTGTGGCAGTATCCCGCGTTCAGAACGCAAGGCGCGTCGGTTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAgg                                                                                                                  <  2:408637/138‑1 (MQ=255)                             tggtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAggg                                                                                                                 <  1:471858/143‑1 (MQ=255)                             tggtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAggg                                                                                                                 <  1:394849/143‑1 (MQ=255)                              ggtggGGATCTCTACCGATGTGATGATCGTTAACTGCGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGCGAAAGAGCCAGGGc                                                                                                                >  2:774919/1‑143 (MQ=255)                               gtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTCTCGTGTGGCCCTGGTGGGGGAAAACGCCAggggc                                                                                                               >  2:828198/1‑141 (MQ=255)                               gtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGcc                                                                                                               <  2:777061/143‑1 (MQ=255)                               gtggGGATCTCTACCGATGGGATGATCGTTAACCGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGacttctggccctggcgctttaccccaccagg                                                                                                               <  2:832584‑M1/143‑32 (MQ=255)                                tggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGtctggccctggcgctttaccccaccagggcca                                                                                                              <  2:89604‑M1/143‑33 (MQ=255)                                 ggtgatcTCTACCGATGTGATGATCTTTAACTGTTGCAGTATTCGCCGTTCAGAAGGCAAAGCGTGTCGGGTGCTTGATCGGCGCAATATTGTTGGTGCCTGTCGTATCGacttctggccctggcgctttaccccaccagggc                                                                                                             <  1:57684‑M1/140‑34 (MQ=255)                                     atttctACCGTTGTCAGGGTCGTTCGCTGTGGCAGTATCGCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGt                                                                                                         <  2:827608/140‑1 (MQ=255)                                     aTCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGt                                                                                                         <  1:496844/143‑1 (MQ=255)                                        tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCTAGGGCCAGAAATcga                                                                                                      <  2:676208‑M2/143‑4 (MQ=255)                                        tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcga                                                                                                      >  2:35764‑M2/1‑140 (MQ=255)                                        tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcga                                                                                                      <  1:57559‑M2/143‑4 (MQ=255)                                            ccGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCGGGTGGGGTAAAGCCCCCGGGCCAGAGATcgatacg                                                                                                  <  2:872992‑M2/143‑8 (MQ=255)                                               aTGTGATGATCTTTAACTGCGGCCGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGacttctggccctggcgctttaccccaccagggccagacgatacgtca                                                                                               <  1:483345‑M1/143‑48 (MQ=255)                                               aTGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGacttctggccctggcgctttaccccaccagggccagacgatacgtca                                                                                               <  1:492534‑M1/143‑48 (MQ=255)                                                tgtgATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                              <  1:113359/143‑1 (MQ=255)                                                tgtgATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                              >  1:113808/1‑143 (MQ=255)                                                  tgatgaTCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGGCGATACGACCtgt                                                                                            >  1:792115/1‑143 (MQ=255)                                                   gatgatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCtgtg                                                                                           <  1:571243/143‑1 (MQ=255)                                                    atgatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGc                                                                                          >  2:218882/1‑143 (MQ=255)                                                    atgatCGTTAACTGTGGCAGTATCCCGCATTCAGAAGGCAAGGCGTGTCGGGTGTTACATCTGCGCAATATTGTTGGTGCCCGACGTATCGTCTGGCCCTGGTGGGGTGGAGCGCCAGGGACAGAAGGCGGTGCGGCAtgtgg                                                                                          >  2:507366/1‑142 (MQ=255)                                                       atCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTAt                                                                                       >  1:424604/1‑143 (MQ=255)                                                       atCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTAt                                                                                       >  1:847440/1‑143 (MQ=255)                                                        tCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATg                                                                                      >  1:461330/1‑143 (MQ=255)                                                         cGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGa                                                                                     <  1:263000/143‑1 (MQ=255)                                                           ttAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAGAGCGCCAGGGCCAGACGTCGATACGACCTGTTCTATGAtt                                                                                   >  1:255218/1‑143 (MQ=255)                                                           ttAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCGGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAtt                                                                                   >  2:553114/1‑143 (MQ=255)                                                             tattgtgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTTCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCa                                                                                 <  1:87780/140‑1 (MQ=255)                                                             aaCTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGCTACGACCGGTGCTATgcgtca                                                                                 >  2:799926/1‑138 (MQ=255)                                                               cTGTGGCAGTATCCCGCGTTCAGATCGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATgctccgta                                                                               >  2:314679/1‑136 (MQ=255)                                                                   ggCAGTATCCGGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATc                                                                           <  2:727387/143‑1 (MQ=255)                                                                    gCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTAGCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAACca                                                                          >  2:291893/1‑143 (MQ=255)                                                                      aGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTCTGATACATAAATccac                                                                        >  1:468845/1‑140 (MQ=255)                                                                      aGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCGATGATTCATACAGcaca                                                                        >  1:481959/1‑143 (MQ=255)                                                                          tCCCGCGTTCAGAAGGCAAGGCGTGTCGGGAGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCAcaacaa                                                                    >  1:583548/1‑143 (MQ=255)                                                                           cccGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGAGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGGTATGAGTCATAAATCAcaacaaa                                                                   >  2:520541/1‑142 (MQ=255)                                                                            ccGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGGATGGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGCGCTATGATTCATAAATCACAACAAtc                                                                  >  2:310276/1‑142 (MQ=255)                                                                             cgcgTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGCGCTATGATTCATGAATGACAACAATaa                                                                 >  2:117569/1‑143 (MQ=255)                                                                                    ggAAGGCAAGGCGTGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGACACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                          <  2:697789/142‑1 (MQ=255)                                                                                    aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                          >  1:207327/1‑143 (MQ=255)                                                                                    aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                          <  1:416045/143‑1 (MQ=255)                                                                                    aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATAACAACAATAACAACAGa                                                          >  2:544594/1‑143 (MQ=255)                                                                                    aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAATCATAAATGACAACAATAACAACAgc                                                          >  2:466958/1‑142 (MQ=255)                                                                                    aGAACGCAGCGCGTGTCCGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                          <  1:23688/143‑1 (MQ=255)                                                                                        ggcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTCAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAAACATAACAACAGAATGa                                                      >  1:732871/1‑143 (MQ=255)                                                                                         gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGaa                                                     <  1:720818/143‑1 (MQ=255)                                                                                         gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCAATGATTCATAAATCACAACAATAACAACAGACTGaa                                                     <  2:582548/143‑1 (MQ=255)                                                                                         gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCCGGTGGGGTAGAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATACGAACAGCCTGag                                                     >  2:688940/1‑142 (MQ=255)                                                                                          caaggcGGGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGACAAAGGGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAg                                                    <  1:329231/143‑1 (MQ=255)                                                                                           tgtgggtgtCGTGGGTTTGCGCTCCGCCATCGTGTTGGTGCCTGCTGCATTGTCTGGCTCTGTTGGGGTAAAGCGCCTGGTGCATAAGTCGATACGACCTGTGCTATGATTCATAAATCACATCAATAACAACAGACTGAAGc                                                   <  2:594145/138‑1 (MQ=255)                                                                                           aaggcGGGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGc                                                   <  2:701882/143‑1 (MQ=255)                                                                                              gcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAAAAATAACAACAGGCTGAACCGac                                                >  2:195366/1‑142 (MQ=255)                                                                                               cGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAAt                                               <  2:792115/143‑1 (MQ=255)                                                                                                 tgtCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGa                                             >  1:716012/1‑143 (MQ=255)                                                                                                      ggTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAGCTCACAACAATAACAACAGACTGAAGCGAATGAGTaaa                                        >  1:160575/1‑143 (MQ=255)                                                                                                      ggTGTTTGATCTGCGCAATAGTGGTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTaaa                                        <  2:875384/143‑1 (MQ=255)                                                                                                      ggTGTTTGAGCGGCGCAATAGTGTTGGCGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTaaa                                        <  1:608267/143‑1 (MQ=255)                                                                                                        tgtTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTACACt                                      >  1:85544/1‑143 (MQ=255)                                                                                                        tgtTTGATCCGCGCAAGAGTGTTGGGGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACt                                      <  1:253693/143‑1 (MQ=255)                                                                                                           ttGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAGCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTCAACTTGa                                   >  2:608730/1‑143 (MQ=255)                                                                                                              aTCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGCAGTCGATGCGACCTGTGCTATGAGTCATCAATCACAACAATAACAACAGACTGCAGCGAAAGAGTAAACTCGATAc                                >  2:556130/1‑143 (MQ=255)                                                                                                               tCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGACCCGACCTGTGCTATGATTCATACATCACAACAATCACAACAGACTGACGCGCATGAGTAAACTTGATACt                               >  2:597396/1‑143 (MQ=255)                                                                                                                   cgcAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAAAAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                           >  2:97397/1‑143 (MQ=255)                                                                                                                      aaTATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATcc                        >  1:854756/1‑143 (MQ=255)                                                                                                                          ttgttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGCGTAAACCAGATACTTTTATCCAACa                    >  2:655859/1‑143 (MQ=255)                                                                                                                           tgttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATc                         <  2:179015/137‑1 (MQ=255)                                                                                                                           tgttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATc                         >  1:179015/1‑137 (MQ=255)                                                                                                                            gttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGACAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATg                  >  2:83172/1‑143 (MQ=255)                                                                                                                                  gCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaa            <  1:314898/143‑1 (MQ=255)                                                                                                                                   ccTGAGGTATCGTGTGGCCCTGGTGGGGTAAAGCGCCAGGGTCAGAAGTCGATACGACCTGGGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaaa           <  2:49739/143‑1 (MQ=255)                                                                                                                                   ccTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaaa           <  1:510518/143‑1 (MQ=255)                                                                                                                                   ccTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaaa           <  2:85544/143‑1 (MQ=255)                                                                                                                                     tGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacat         <  1:492534‑M2/143‑97 (MQ=255)                                                                                                                                     tGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatacggccgcagttaaagatcatcacat         <  1:483345‑M2/143‑97 (MQ=255)                                                                                                                                     tGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGGTACTTTTATCCTACATGCGTTAAACg         >  1:322168/1‑143 (MQ=255)                                                                                                                                       aCGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGGTACTTTTATCCAACATGCTGTAAACGCt       >  1:542469/1‑143 (MQ=255)                                                                                                                                        cGTATCGatctctggcccgggggctttaccccacccgggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcgg      <  2:872992‑M1/143‑137 (MQ=255)                                                                                                                                         gTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACACCAATCACCACCGACTCAAGCGAATGAGTAAACTTGATACTTTTATCAAACATGCTGTAAACGCTGt     >  1:77444/1‑143 (MQ=255)                                                                                                                                            tCGatttctggccctagcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtaga  <  2:676208‑M1/143‑141 (MQ=255)                                                                                                                                            tCGacttctggccctggcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtaga  <  1:57559‑M1/143‑141 (MQ=255)                                                                                                                                            tCGacttctggccctggcgctttaccccaccagggccagacgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtaga  >  2:35764‑M1/1‑3 (MQ=255)                                                                                                                                              |                                                                                                                                             CACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCC  >  NC_000913/1463304‑1463585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.