New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1463445	78 (1.760)	5 (0.120)	4/250	NT	6.1%	intergenic (+7/‑94)	paaK/paaX	phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX
	?	NC_000913	= 1463482	79 (1.880)					intergenic (+44/‑57)	paaK/paaX	phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX

ATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGG  >  NC_000913/1463340‑1463621                                                                                                                                               |                                                                                                                                            atttctACCGTTGTCAGGGTCGTTCGCTGTGGCAGTATCGCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGt                                                                                                                                             <  2:827608/140‑1 (MQ=255) aTCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGt                                                                                                                                             <  1:496844/143‑1 (MQ=255)    tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCTAGGGCCAGAAATcga                                                                                                                                          <  2:676208‑M2/143‑4 (MQ=255)    tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcga                                                                                                                                          >  2:35764‑M2/1‑140 (MQ=255)    tctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcga                                                                                                                                          <  1:57559‑M2/143‑4 (MQ=255)        ccGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCGGGTGGGGTAAAGCCCCCGGGCCAGAGATcgatacg                                                                                                                                      <  2:872992‑M2/143‑8 (MQ=255)            tgtgATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                                                                  <  1:113359/143‑1 (MQ=255)            tgtgATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                                                                  >  1:113808/1‑143 (MQ=255)              tgatgaTCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGGCGATACGACCtgt                                                                                                                                >  1:792115/1‑143 (MQ=255)               gatgatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCtgtg                                                                                                                               <  1:571243/143‑1 (MQ=255)                atgatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGc                                                                                                                              >  2:218882/1‑143 (MQ=255)                atgatCGTTAACTGTGGCAGTATCCCGCATTCAGAAGGCAAGGCGTGTCGGGTGTTACATCTGCGCAATATTGTTGGTGCCCGACGTATCGTCTGGCCCTGGTGGGGTGGAGCGCCAGGGACAGAAGGCGGTGCGGCAtgtgg                                                                                                                              >  2:507366/1‑142 (MQ=255)                   atCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTAt                                                                                                                           >  1:847440/1‑143 (MQ=255)                   atCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTAt                                                                                                                           >  1:424604/1‑143 (MQ=255)                    tCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATg                                                                                                                          >  1:461330/1‑143 (MQ=255)                     cGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGa                                                                                                                         <  1:263000/143‑1 (MQ=255)                       ttAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAGAGCGCCAGGGCCAGACGTCGATACGACCTGTTCTATGAtt                                                                                                                       >  1:255218/1‑143 (MQ=255)                       ttAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCGGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAtt                                                                                                                       >  2:553114/1‑143 (MQ=255)                         tattgtgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTTCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCa                                                                                                                     <  1:87780/140‑1 (MQ=255)                         aaCTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGCTACGACCGGTGCTATgcgtca                                                                                                                     >  2:799926/1‑138 (MQ=255)                           cTGTGGCAGTATCCCGCGTTCAGATCGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATgctccgta                                                                                                                   >  2:314679/1‑136 (MQ=255)                               ggCAGTATCCGGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATc                                                                                                               <  2:727387/143‑1 (MQ=255)                                gCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTAGCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAACca                                                                                                              >  2:291893/1‑143 (MQ=255)                                  aGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTCTGATACATAAATccac                                                                                                            >  1:468845/1‑140 (MQ=255)                                  aGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCGATGATTCATACAGcaca                                                                                                            >  1:481959/1‑143 (MQ=255)                                      tCCCGCGTTCAGAAGGCAAGGCGTGTCGGGAGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCAcaacaa                                                                                                        >  1:583548/1‑143 (MQ=255)                                       cccGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGAGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGGTATGAGTCATAAATCAcaacaaa                                                                                                       >  2:520541/1‑142 (MQ=255)                                        ccGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGGATGGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGCGCTATGATTCATAAATCACAACAAtc                                                                                                      >  2:310276/1‑142 (MQ=255)                                         cgcgTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGCGCTATGATTCATGAATGACAACAATaa                                                                                                     >  2:117569/1‑143 (MQ=255)                                                ggAAGGCAAGGCGTGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGACACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                                                              <  2:697789/142‑1 (MQ=255)                                                aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                                                              >  1:207327/1‑143 (MQ=255)                                                aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                                                              <  1:416045/143‑1 (MQ=255)                                                aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATAACAACAATAACAACAGa                                                                                              >  2:544594/1‑143 (MQ=255)                                                aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAATCATAAATGACAACAATAACAACAgc                                                                                              >  2:466958/1‑142 (MQ=255)                                                aGAACGCAGCGCGTGTCCGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                                                              <  1:23688/143‑1 (MQ=255)                                                    ggcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTCAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAAACATAACAACAGAATGa                                                                                          >  1:732871/1‑143 (MQ=255)                                                     gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGaa                                                                                         <  1:720818/143‑1 (MQ=255)                                                     gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCAATGATTCATAAATCACAACAATAACAACAGACTGaa                                                                                         <  2:582548/143‑1 (MQ=255)                                                     gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCCGGTGGGGTAGAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATACGAACAGCCTGag                                                                                         >  2:688940/1‑142 (MQ=255)                                                      caaggcGGGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGACAAAGGGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAg                                                                                        <  1:329231/143‑1 (MQ=255)                                                       tgtgggtgtCGTGGGTTTGCGCTCCGCCATCGTGTTGGTGCCTGCTGCATTGTCTGGCTCTGTTGGGGTAAAGCGCCTGGTGCATAAGTCGATACGACCTGTGCTATGATTCATAAATCACATCAATAACAACAGACTGAAGc                                                                                       <  2:594145/138‑1 (MQ=255)                                                       aaggcGGGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGc                                                                                       <  2:701882/143‑1 (MQ=255)                                                          gcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAAAAATAACAACAGGCTGAACCGac                                                                                    >  2:195366/1‑142 (MQ=255)                                                           cGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAAt                                                                                   <  2:792115/143‑1 (MQ=255)                                                             tgtCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGa                                                                                 >  1:716012/1‑143 (MQ=255)                                                                  ggTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAGCTCACAACAATAACAACAGACTGAAGCGAATGAGTaaa                                                                            >  1:160575/1‑143 (MQ=255)                                                                  ggTGTTTGATCTGCGCAATAGTGGTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTaaa                                                                            <  2:875384/143‑1 (MQ=255)                                                                  ggTGTTTGAGCGGCGCAATAGTGTTGGCGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTaaa                                                                            <  1:608267/143‑1 (MQ=255)                                                                    tgtTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTACACt                                                                          >  1:85544/1‑143 (MQ=255)                                                                    tgtTTGATCCGCGCAAGAGTGTTGGGGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACt                                                                          <  1:253693/143‑1 (MQ=255)                                                                       ttGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAGCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTCAACTTGa                                                                       >  2:608730/1‑143 (MQ=255)                                                                          aTCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGCAGTCGATGCGACCTGTGCTATGAGTCATCAATCACAACAATAACAACAGACTGCAGCGAAAGAGTAAACTCGATAc                                                                    >  2:556130/1‑143 (MQ=255)                                                                           tCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGACCCGACCTGTGCTATGATTCATACATCACAACAATCACAACAGACTGACGCGCATGAGTAAACTTGATACt                                                                   >  2:597396/1‑143 (MQ=255)                                                                               cgcAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAAAAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                                                               >  2:97397/1‑143 (MQ=255)                                                                                  aaTATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATcc                                                            >  1:854756/1‑143 (MQ=255)                                                                                      ttgttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGCGTAAACCAGATACTTTTATCCAACa                                                        >  2:655859/1‑143 (MQ=255)                                                                                       tgttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATc                                                             <  2:179015/137‑1 (MQ=255)                                                                                       tgttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATc                                                             >  1:179015/1‑137 (MQ=255)                                                                                        gttgGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGACAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATg                                                      >  2:83172/1‑143 (MQ=255)                                                                                              gCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaa                                                <  1:314898/143‑1 (MQ=255)                                                                                               ccTGAGGTATCGTGTGGCCCTGGTGGGGTAAAGCGCCAGGGTCAGAAGTCGATACGACCTGGGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaaa                                               <  2:49739/143‑1 (MQ=255)                                                                                               ccTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaaa                                               <  2:85544/143‑1 (MQ=255)                                                                                               ccTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTaaa                                               <  1:510518/143‑1 (MQ=255)                                                                                                 tGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacat                                             <  1:492534‑M2/143‑97 (MQ=255)                                                                                                 tGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatacggccgcagttaaagatcatcacat                                             <  1:483345‑M2/143‑97 (MQ=255)                                                                                                 tGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGGTACTTTTATCCTACATGCGTTAAACg                                             >  1:322168/1‑143 (MQ=255)                                                                                                   aCGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGGTACTTTTATCCAACATGCTGTAAACGCt                                           >  1:542469/1‑143 (MQ=255)                                                                                                     gTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACACCAATCACCACCGACTCAAGCGAATGAGTAAACTTGATACTTTTATCAAACATGCTGTAAACGCTGt                                         >  1:77444/1‑143 (MQ=255)                                                                                                           tCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGCATGAGTAAACTTGATGCTTTTATCCACAATGCTGTAAACCCTGCTCCGGt                                   >  1:233063/1‑143 (MQ=255)                                                                                                            cTGTCCCTGGTGGGGTAAAGCGCCAGGCCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTc                                  <  1:704689/143‑1 (MQ=255)                                                                                                             tGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGA‑‑gatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacagttaacgatcatcacatcggtagagatcccca                                <  2:89604‑M2/143‑111 (MQ=255)                                                                                                              ggCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAGACGCAGCTCCGGTTAg                                >  1:802504/1‑143 (MQ=255)                                                                                                               gCCCTGGTGTGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGATGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGt                               <  1:520541/143‑1 (MQ=255)                                                                                                               gCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgacaggcaccaacaatattgcgccgatcaagcacccgacacgctttgccttctgaacggcgaatactgcaacagttaaagatcatcacatcggtagagatcacc                               <  1:57684‑M2/143‑111 (MQ=255)                                                                                                                cccTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAACTCACCACACTAACAACACACTGAAGCGAATGAGTAAACTTGATACTTTTATCCCACATGCTGTAAACCCCGTTCCGGTCAGTg                              >  2:12743/1‑143 (MQ=255)                                                                                                                 ccTGGTGGGGTAAAGCGCCAGGGCCAGAAGTcgatacgtcaggcaccaacaatattgcgcagatcaaacacccgacacgccttgccttctgaacgcgggatactgccacggttaacgatcatcccatcggtagagatccccac                             <  2:832584‑M2/143‑113 (MQ=255)                                                                                                                 ccTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTgg                             >  1:634685/1‑143 (MQ=255)                                                                                                                 ccTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTgg                             <  1:715503/143‑1 (MQ=255)                                                                                                                   tggtggGGTGCAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGca                           <  2:467003/143‑1 (MQ=255)                                                                                                                   tggtggGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGGAAACGCTGTGCCGGTCAGTGGca                           >  1:329523/1‑143 (MQ=255)                                                                                                                        gggTAAACCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCt                      <  1:97099/143‑1 (MQ=255)                                                                                                                          gTAAAGCGCCAGGGCCAGAAGGCGATGCGACATGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGGAAACTTGATACTTTTATCCAACATGCTGTCAACGCTGTTCCGGTCAGTGGCGCATCttt                    >  1:563393/1‑143 (MQ=255)                                                                                                                             aaGCGCCAGCGAACGAATTCGAGACGTCCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGAt                 <  2:97065/143‑1 (MQ=255)                                                                                                                               gcgcCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGAtct               <  1:482943/143‑1 (MQ=255)                                                                                                                                cgcCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGAtctc              <  2:463839/143‑1 (MQ=255)                                                                                                                                  ccAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATACTGTAAAAGCTGTTCCGGTCAGTGACACATCTTTGATttccg            >  2:635541/1‑142 (MQ=255)                                                                                                                                    aGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCctct          >  1:340200/1‑143 (MQ=255)                                                                                                                                     gggCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCcgctc         >  1:111741/1‑143 (MQ=255)                                                                                                                                      ggCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCctctct        <  1:616479/143‑1 (MQ=255)                                                                                                                                         cAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTa     >  2:94431/1‑143 (MQ=255)                                                                                                                                          aGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTAt    <  2:716012/143‑1 (MQ=255)                                                                                                                                          aGAAGTCGATACGACCTGTGATATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGAAACCGCTGGGCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTAt    <  2:481959/143‑1 (MQ=255)                                                                                                                                            aaGTCGATACGACCTGTGCTATGATTCATAAACCACACAGAGAACTACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATgg  <  2:182533/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                            ATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCGTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGG  >  NC_000913/1463340‑1463621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.