| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3298679 | 117 (0.820) | 6 (0.040) | 4/262 | NT | 5.1% | coding (168/636 nt) | yraR | putative nucleoside‑diphosphate‑sugar epimerase |
| ? | NC_000913 | = 3298748 | 110 (0.810) | coding (99/636 nt) | yraR | putative nucleoside‑diphosphate‑sugar epimerase | |||||
ACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3298524‑3298679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgccGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAGAG < NC_000913/3298748‑3298604 ACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACC < 1:1745092/150‑1ACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACC > 2:1204445/1‑150ACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACC > 2:1875858/1‑150 CAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTG < 2:578655/150‑1 AACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCACTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGC > 1:2361468/1‑150 CTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCC > 1:1261758/1‑150 CTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAACCACAATGTCGATGGGATCGGTGACCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGGTGGCGCAG < 1:954375/150‑1 CTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAG < 2:1261758/150‑1 CTTTGCTCCCCGCTTCTCGCCGCGGGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAG < 2:2414957/150‑1 TTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGG < 1:221743/150‑1 GCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCTCAACTCAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGAC < 1:1383103/150‑1 CTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAG < 1:1255620/150‑1 CTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAG > 1:51403/1‑150 CTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAG > 2:1613879/1‑150 TGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAGA < 1:1854241/150‑1 GCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAGAG > 1:1925290/1‑150 ACCAACATATGCTGCGCGCCCAGTCGCCGCCCGGTTAATGCGGTATCCACTACCAGCGTGTAATCGGCATGAATAAACGCCTCTTTGCTCCCCGCTTCTCGCCGCGTGGTGCCGAGACAACAAAACACAATGTCGATGGGATCGGTGACCTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3298524‑3298679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgccGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAGAG < NC_000913/3298748‑3298604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |